| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is fixG [H]
Identifier: 227080273
GI number: 227080273
Start: 34310
End: 35797
Strand: Reverse
Name: fixG [H]
Synonym: VCM66_0036
Alternate gene names: 227080273
Gene position: 35797-34310 (Counterclockwise)
Preceding gene: 227080274
Following gene: 227080272
Centisome position: 1.24
GC content: 49.06
Gene sequence:
>1488_bases ATGAGCAATGTATTTGAGTGTGAACAAAAGAAATCACACCGAATGCCTGAAAAGGATAGTGTCATGAGTCAGGATAAAAT CGATGTTAAAGATGTGACTCCCAAAGTGTTCAATCCCAAGACCCATAAAGGGCAAGGCGGGGATCGCTTTAACCCAAGTA ATCGCATCTATGTTCGTGAAAGTAAAGGAACCTACCAGAAACTGCGCCGTTATGGTGGCTGGTTTCTGCTGCTGTTGTTT GGATTGGTTCCTTGGATCTCTTATGGCGATCGGCAAGCCATCTTGCTTGATATTGGCAACCAGCAATTTAACTTCTTCGG AACCACACTCTACCCGCAAGATCTGACCTTATTGGCGCTGCTGTTTATGATCGCCGCCTTCGGCCTGTTCTTTATCACTA CCTTCTTAGGCCGTGTCTGGTGTGGTTATCTCTGCCCGCAAACCGTGTGGACATTTATGTACATCTGGTTTGAAGAAAAA CTCGAAGGCAATGCCAACAAAAGACGTAAGCAAGACAACAGTCCGATGACGGCAGAACTCGTGGCGCGTAAAACCTTAAA GCACATCGCTTGGTTGGCGATTGCCTTAGTCACTGGTTTCACTTTTGTCGGCTACTTTGTGCCCATCCGCGCACTGGTGA TCGACTTCTTTACTTTAAGTGCCGCGTTCTGGCCAGTGTTTTGGGTACTGTTTTTTGCCCTTTGTACTTACGGCAACGCA GGCTGGATGCGCTCAATCATGTGTATCCACATGTGCCCATATGCGCGCTTCCAATCCGCCATGTTCGATAAAGATACCTT TATTGTCGGCTATGATGTCGCGCGCGGCGAACAACGTGGGCCACGCTCTCGCAAAGCGGATCCCAAAGCGCTCGGTTTAG GCGACTGTATTGATTGCGATCTCTGCGTGCAAGTCTGCCCAACCGGTATCGATATTCGTGACGGCTTGCAGTATGAGTGC ATCAACTGCGGGGCGTGTATTGATGCTTGTGACAACACCATGGAACGTATGGGCTACGCGAAAGGGCTGATCAGCTACAC CACAGAACATCGCCTATCTGGCAAACACACCAAAGTGATGCGACCCAAACTGCTCGGTTATGGAGCGGTGTTCTTGGTCA TGATTGGCTTGTTCTTTGCTCAAGTGGCCGCCGTGGATCCCGCGGGGTTAACCGTTCTTCGCGATCGCACTCAACTGTTT AGAACCAACAGCTCGGGCGAAATTGAAAACACTTACAACCTCAAAGTGATCAACAAAACCCAGCAGCCACAGACCTATCA GCTGTCGGTTAAAGGATTGGATCCAGTCTCTTGGTACGGCAAACAAAGTGTGGTTGTGCAACCGGGTGAAGTACTCAATC TCCCGATGACGCTCGGAGCCAAACCAGAAAATCTCAGCTCTGCGGTCACGACAATTCAGTTTATACTGCACGACGAAAGC CACCAATTTACCCTTGAAGTCGAGAGCCGATTTATTCAAAAGCTCTGA
Upstream 100 bases:
>100_bases GTTAAAGGTTGATTGCCTTAAAGAAATGAACGTTTGATTGACGCTATACTTACGGCCTAAAAAACCATCAGTCCCCTCTT ACATCAGCCTTTAAGAGGGA
Downstream 100 bases:
>100_bases CACTCACCAGTATGGTAAAGGGCTCAGTAATGAGCCCTTTTTATTCAATGACCCAAGCCACGTTTCATTTTGATGCTTTA ACTCCCGATCTGATTTGGTA
Product: FixG-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSNVFECEQKKSHRMPEKDSVMSQDKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLF GLVPWISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEK LEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNA GWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYEC INCGACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTVLRDRTQLF RTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHDES HQFTLEVESRFIQKL
Sequences:
>Translated_495_residues MSNVFECEQKKSHRMPEKDSVMSQDKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLF GLVPWISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEK LEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNA GWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYEC INCGACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTVLRDRTQLF RTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHDES HQFTLEVESRFIQKL >Mature_494_residues SNVFECEQKKSHRMPEKDSVMSQDKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFG LVPWISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKL EGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNAG WMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECI NCGACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTVLRDRTQLFR TNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHDESH QFTLEVESRFIQKL
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56216; Mature: 56085
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVFECEQKKSHRMPEKDSVMSQDKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRE CCCCHHHHHHHHCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC SKGTYQKLRRYGGWFLLLLFGLVPWISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLAL CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCHHHHHHH LFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGNANKRRKQDNSPMTAEL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHH VARKTLKHIAWLAIALVTGFTFVGYFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH GWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCD HHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH LCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVM HHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC RPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTVLRDRTQLFRTNSSGEIENTYNLKVINKT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC QQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHDES CCCCEEEEEECCCCCHHHCCCCEEEECCCCEEECCEECCCCCCHHHHHHHHHHHEEECCC HQFTLEVESRFIQKL CEEEEEHHHHHHHCC >Mature Secondary Structure SNVFECEQKKSHRMPEKDSVMSQDKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRE CCCHHHHHHHHCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC SKGTYQKLRRYGGWFLLLLFGLVPWISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLAL CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCHHHHHHH LFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGNANKRRKQDNSPMTAEL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHH VARKTLKHIAWLAIALVTGFTFVGYFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH GWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCD HHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH LCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVM HHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC RPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTVLRDRTQLFRTNSSGEIENTYNLKVINKT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC QQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHDES CCCCEEEEEECCCCCHHHCCCCEEEECCCCEEECCEECCCCCCHHHHHHHHHHHEEECCC HQFTLEVESRFIQKL CEEEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]