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The map label for this gene is 226951015

Identifier: 226951015

GI number: 226951015

Start: 4074041

End: 4074703

Strand: Reverse

Name: 226951015

Synonym: CLM_4052

Alternate gene names: NA

Gene position: 4074703-4074041 (Counterclockwise)

Preceding gene: 226951016

Following gene: 226951014

Centisome position: 98.06

GC content: 26.24

Gene sequence:

>663_bases
GTGAGTAGAGTATCTAATAAAATAAAAGAAGCTAGGTTAAAAAAAGGGCTAACACAAAAACAATTGGCTAAGAAATTAGG
TGTAGCGGAGAACTTTATAAATGAGGTAGAATCGGGAAGAAAAATAATAAATGAAAGTTTAATGAATAGAATATCAAAAG
TATTAGGAAAAGGAATAAATGATATAGGAATTTCTTTTGAAGAGGAAGTGTCCTTAGAATCTAAAAGAGAAACTTCCATA
AATAAAGATAATAAAATAAAGGATGTATGGGATAATGCCTTTAGTTCTATAATAAAGGATGTTCCAGTTTATAATTATAA
TTTAGATAGAGTGATTGATAAAAAACAATTACCTGTTGTAGGAAATAAAGTTGAAGGGATACACCAAGATAAAGTTTTGT
TTTTAAAGATAGAAGAAGAGGATATGTCTGGCTTTAGAATAAATAAAGGAGATATAGCCTTTGGATATATGCATCACGAA
ATGGAAAATAACTCTATATTTCTTATAGAACATAATAATAAAAGATCTGTACGGCAATTAAAAAGATTAGACGGAGATAA
AATATTATTAATAAACAATGGAATATCTTTAAGAACTGAAGCTGTTAGACTAAAAGATATAAAAATTATAGCTAGATTAT
TAAAATTAGAAATAACTCTTTAA

Upstream 100 bases:

>100_bases
CAGAAACTTCTATAGACTGGGAATTCAAATATTTAGTAGATCATTTAATGGAAGAAAGAGAATGGTATAGAAAACAAAAT
AGGTAAAAGGTGATGAAAAA

Downstream 100 bases:

>100_bases
AAATAAATTTAACTAATTACTATTGAGAGTAAAGCTAAATTTTACATTAAATATAAATAAAAAACCATTAAAACACTATC
AAATATTATTGTAGTTTAAT

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; LacI/Xre Family Transcriptional Regulator; LacI Family Transcription Regulator; Plasmid Maintenance System Antidote Protein XRE Family

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSRVSNKIKEARLKKGLTQKQLAKKLGVAENFINEVESGRKIINESLMNRISKVLGKGINDIGISFEEEVSLESKRETSI
NKDNKIKDVWDNAFSSIIKDVPVYNYNLDRVIDKKQLPVVGNKVEGIHQDKVLFLKIEEEDMSGFRINKGDIAFGYMHHE
MENNSIFLIEHNNKRSVRQLKRLDGDKILLINNGISLRTEAVRLKDIKIIARLLKLEITL

Sequences:

>Translated_220_residues
MSRVSNKIKEARLKKGLTQKQLAKKLGVAENFINEVESGRKIINESLMNRISKVLGKGINDIGISFEEEVSLESKRETSI
NKDNKIKDVWDNAFSSIIKDVPVYNYNLDRVIDKKQLPVVGNKVEGIHQDKVLFLKIEEEDMSGFRINKGDIAFGYMHHE
MENNSIFLIEHNNKRSVRQLKRLDGDKILLINNGISLRTEAVRLKDIKIIARLLKLEITL
>Mature_219_residues
SRVSNKIKEARLKKGLTQKQLAKKLGVAENFINEVESGRKIINESLMNRISKVLGKGINDIGISFEEEVSLESKRETSIN
KDNKIKDVWDNAFSSIIKDVPVYNYNLDRVIDKKQLPVVGNKVEGIHQDKVLFLKIEEEDMSGFRINKGDIAFGYMHHEM
ENNSIFLIEHNNKRSVRQLKRLDGDKILLINNGISLRTEAVRLKDIKIIARLLKLEITL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25241; Mature: 25110

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVSNKIKEARLKKGLTQKQLAKKLGVAENFINEVESGRKIINESLMNRISKVLGKGIN
CCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIGISFEEEVSLESKRETSINKDNKIKDVWDNAFSSIIKDVPVYNYNLDRVIDKKQLPVV
CCCCCCHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
GNKVEGIHQDKVLFLKIEEEDMSGFRINKGDIAFGYMHHEMENNSIFLIEHNNKRSVRQL
CCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEEEEEECCCCEEEEEECCCCHHHHHH
KRLDGDKILLINNGISLRTEAVRLKDIKIIARLLKLEITL
HHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRVSNKIKEARLKKGLTQKQLAKKLGVAENFINEVESGRKIINESLMNRISKVLGKGIN
CHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIGISFEEEVSLESKRETSINKDNKIKDVWDNAFSSIIKDVPVYNYNLDRVIDKKQLPVV
CCCCCCHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
GNKVEGIHQDKVLFLKIEEEDMSGFRINKGDIAFGYMHHEMENNSIFLIEHNNKRSVRQL
CCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEEEEEECCCCEEEEEECCCCHHHHHH
KRLDGDKILLINNGISLRTEAVRLKDIKIIARLLKLEITL
HHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA