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The map label for this gene is mcp4 [H]

Identifier: 226951014

GI number: 226951014

Start: 4071943

End: 4073739

Strand: Reverse

Name: mcp4 [H]

Synonym: CLM_4051

Alternate gene names: 226951014

Gene position: 4073739-4071943 (Counterclockwise)

Preceding gene: 226951015

Following gene: 226951011

Centisome position: 98.04

GC content: 28.05

Gene sequence:

>1797_bases
ATGAAGGGCACAGTAGTAGCAACATGGGTAAAAACCTGCAGGAAGCTCTATGGGGGAGAAGCGGTTGATAAAGCTATGAA
TGCTGTAGGATGGCAAGGCAAAATATTTTCACCAATGGAAAATGTTGAAGATACAAAAGTTAAGAATATGATAAATGAAA
TAGCAAGTAATGTTAATAAGGATGTAAAGACTTTATGGGGACAAATAGGACAAGATAATCTAAAAGCTTTTAATAATGAT
TATCCAGCTTTTTTCGAACATGAGAACTTATATTCATTTTTAAAGTCTATGTTTGATGTTCATATAGTTATGACTAAAAA
ATTCCCAGGGGCTAAGCCGCCACTTTTAACTATAGAACCTATATCTGAAAAAGAAGCTATATTCAGTTATAGCTCCAAAA
GAGGAATGTTTGATTACTTTTTAGGACTCTTAAAAGGAAGTGCAGAGCATTTTAAAGAAAATATTAAAGTAGATGAAATA
GAAAGAAAAGATGATTTTTTAAAACTTAAGCTTACCTTTGAAAAAAATATTTATTACAATAAAACTTTTAAATTTAATAA
AATATTATCTTTAGGATTTATAAAAAATATAGGTGGAAAAGTTGCTTTATTTACATTCATATTAACTATTTTATCATCTC
TTGCTTTACTAGGATTTAATAATTTATTTAAGGTCTTATCCTTATCTTTTATATCTTCTTTTACAGCTTATATATCAACA
GAAATATTGTTAAAGCCTAAATATTTAATATTTGAAGAAATAAATAAAATAAATAAAAACCATTATGTAGAAGATGGTGA
TATTAAAACAGGTGATTTTTTAGAGGAATTATATAAAGAGTTAAAGAAACATAAAGATATAATTAAAGCTGATTTTGTAG
GTTTTAAGGGTGTTACAGATGAGATGAATACTTTCGTAGGTAATATAAATGTTATATCAGAAACTATGAGTCATACATCT
ACAGAGATATCAGGGGTAGTTGAACAAGTAGCTAGTTGTGCAGTGAACCAGGCTGAAAATACTGAACAAGTAGTAGCAGT
TTTAAATAATAATATACAAAATTTAAAAGATATAGTCAATAGTGAAAATAGTAATAAGTTAGAATTAGAAAAGGCTTTAG
AAAAGGTAAATAACAGTTATAATAATGTTAATAATACTAGTAAAAATATTTTAGATTCCCTTGAGAAATTCCAAAAAGTT
AAGGATAAAGGATTAGAATTAGAAACCAAGGCAAAAGATATAACAAACATAGTATCCATTGTATCAGGGATATCAGAACA
AACTAATTTATTAGCCCTAAATGCATCCATTGAAGCAGCAAGGGCAGGAGAACAAGGTAAAGGTTTTGCGGTAGTTGCAG
AAGAGGTTAGAAAGCTAGCAGAACAGTCTAAAGAGGCAGTTGAAGAAATTAATAATAATCTTATAGAATTTGCAGGAGAT
ATAAAAAATTTAGTTATTAGAATAGAATCTCAATATAATGTATTAGAGCAGGAAACAGATAGATTGGAAGAGGTTAGAGA
TATTAGTTATGGAGCTACAACATCTATAGGTACCGTAGCTTCTGCCATGATTAAGACTATAAATGAACTTAATAAAGAAG
CAGATTCTATATCAAGTATATATGATAACATAGAATCTTTGGCTGCTATAGCAGAAGAAAATTCAGCTTCATCGGAAGAA
GTTAGTGCTAACGTTTCAAGCTATACTAATGAGATTAAAAAATTAGTTAATAATATTCATGAGTTTAAACAGATAACAGA
AACATTTAAATCAGATTTAAGTAGATATAAAATATAA

Upstream 100 bases:

>100_bases
CTTTGTAAATAATTTGCATACATTATATAATTAATATATTAAAAGAATTTAAATAATCACGATTATTAAATAGAAATATA
AGGTATGAGGAGGAATCTTT

Downstream 100 bases:

>100_bases
TAAGAGGGTTTATTTATTTTTTATTTAAAAATTCTATAAAACATAAATTTTATTTTGAGAAAGCTATGAAATATAAATAT
AATATCTAAATTTCATAGCT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MKGTVVATWVKTCRKLYGGEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNKDVKTLWGQIGQDNLKAFNND
YPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEPISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEI
ERKDDFLKLKLTFEKNIYYNKTFKFNKILSLGFIKNIGGKVALFTFILTILSSLALLGFNNLFKVLSLSFISSFTAYIST
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTDEMNTFVGNINVISETMSHTS
TEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVNSENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKV
KDKGLELETKAKDITNIVSIVSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSIYDNIESLAAIAEENSASSEE
VSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI

Sequences:

>Translated_598_residues
MKGTVVATWVKTCRKLYGGEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNKDVKTLWGQIGQDNLKAFNND
YPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEPISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEI
ERKDDFLKLKLTFEKNIYYNKTFKFNKILSLGFIKNIGGKVALFTFILTILSSLALLGFNNLFKVLSLSFISSFTAYIST
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTDEMNTFVGNINVISETMSHTS
TEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVNSENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKV
KDKGLELETKAKDITNIVSIVSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSIYDNIESLAAIAEENSASSEE
VSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI
>Mature_598_residues
MKGTVVATWVKTCRKLYGGEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNKDVKTLWGQIGQDNLKAFNND
YPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEPISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEI
ERKDDFLKLKLTFEKNIYYNKTFKFNKILSLGFIKNIGGKVALFTFILTILSSLALLGFNNLFKVLSLSFISSFTAYIST
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTDEMNTFVGNINVISETMSHTS
TEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVNSENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKV
KDKGLELETKAKDITNIVSIVSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSIYDNIESLAAIAEENSASSEE
VSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=26.8608414239482, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI2367378, Length=235, Percent_Identity=30.6382978723404, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788194, Length=263, Percent_Identity=26.9961977186312, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1787690, Length=396, Percent_Identity=22.979797979798, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789453, Length=291, Percent_Identity=26.8041237113402, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67124; Mature: 67124

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTVVATWVKTCRKLYGGEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNK
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCH
DVKTLWGQIGQDNLKAFNNDYPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEP
HHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECC
ISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEIERKDDFLKLKLTFEKNIYYN
CCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCEEEEEEEEECCEEEC
KTFKFNKILSLGFIKNIGGKVALFTFILTILSSLALLGFNNLFKVLSLSFISSFTAYIST
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTD
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EMNTFVGNINVISETMSHTSTEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHC
SENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKVKDKGLELETKAKDITNIVSI
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
HHCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSI
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDNIESLAAIAEENSASSEEVSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGTVVATWVKTCRKLYGGEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNK
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCH
DVKTLWGQIGQDNLKAFNNDYPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEP
HHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECC
ISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEIERKDDFLKLKLTFEKNIYYN
CCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCEEEEEEEEECCEEEC
KTFKFNKILSLGFIKNIGGKVALFTFILTILSSLALLGFNNLFKVLSLSFISSFTAYIST
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTD
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EMNTFVGNINVISETMSHTSTEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHC
SENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKVKDKGLELETKAKDITNIVSI
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
HHCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSI
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDNIESLAAIAEENSASSEEVSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]