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The map label for this gene is 226950977

Identifier: 226950977

GI number: 226950977

Start: 4030803

End: 4031630

Strand: Reverse

Name: 226950977

Synonym: CLM_4006

Alternate gene names: NA

Gene position: 4031630-4030803 (Counterclockwise)

Preceding gene: 226950978

Following gene: 226950976

Centisome position: 97.02

GC content: 21.5

Gene sequence:

>828_bases
ATGAAGCCAATAATAGATATAAGCTCTAATATAATGAAAGACTATAATAAAAATAATTTTATATTTAAAATAAAAGATGA
GTTTTTAACACATTTTAGAGGGAATTGTTTCATAGAGGAATTAAATTTAGTAATATCCAAAGTGAGAATATCTCCAAATT
TTAATGAAAAAGCTTATTATAAAAATATAAAACGAAGTATAAAATATTCAAGACATAAAGATTTTGTGTTAGCGCCAAAA
ACTTTTAGATTTTTAGATTATTATTTATTAAATAGTTTTCAAAAGGAATTGTTTGCTTTATCTGTATGTGAAAGTATGAA
AACTGTATTAAGGTTAAAGGGTAAAACCATAAGAAATAGTTGCATAGTAATATTTGATGCAAAAGAGGAATATGTTTTTA
ATATTATAAATTGTGTTTCTAAAGAAGCAAAGTACATAATACTAGTTTCTGAGGATTTAAATAAATTAGCAAATTTAAAT
GATTATATAATAGCCAATTATGGAATAACACCTATTATAACTAAGGATATAAAAACTTCTTTTAGTAAAGCAGATTTTAT
AATAACAACTAAAGATGTAGAAATTATAAAAAGCATACCAGTATGGTATATTAATAATAGTAAAATTTATGAAAACAAAA
GCAGTTGCAACATAAATAATATAATATACAAAGTTCCTTGGAAAACTAATTTAAATTTTAATCCAGAGTTATTAGGTGCA
ATACTTTGTCAAATGGATAAAAAGAATGTAGAAGAAGCAATAAGATATAATGGTATTGTATTAGATAAAATAATGTTTAA
TAAAGATATAGTAAAAATAATTAGATAA

Upstream 100 bases:

>100_bases
AAAGTGTTAGAAGAATTAATTAAGTATAGAGAAACATTAAGGGAATTTTAAATAAATATTTACATAGAAATATATTGTAA
TCAATTTTTATGGTGAAATA

Downstream 100 bases:

>100_bases
AAGTAAGGAATACTGAAATGTTGACAGGATAAATTACCTGTTTTATAATTACTTAAATGTTTCTTTTATGTTATAATGTT
AAGAATGTATCATAATATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKPIIDISSNIMKDYNKNNFIFKIKDEFLTHFRGNCFIEELNLVISKVRISPNFNEKAYYKNIKRSIKYSRHKDFVLAPK
TFRFLDYYLLNSFQKELFALSVCESMKTVLRLKGKTIRNSCIVIFDAKEEYVFNIINCVSKEAKYIILVSEDLNKLANLN
DYIIANYGITPIITKDIKTSFSKADFIITTKDVEIIKSIPVWYINNSKIYENKSSCNINNIIYKVPWKTNLNFNPELLGA
ILCQMDKKNVEEAIRYNGIVLDKIMFNKDIVKIIR

Sequences:

>Translated_275_residues
MKPIIDISSNIMKDYNKNNFIFKIKDEFLTHFRGNCFIEELNLVISKVRISPNFNEKAYYKNIKRSIKYSRHKDFVLAPK
TFRFLDYYLLNSFQKELFALSVCESMKTVLRLKGKTIRNSCIVIFDAKEEYVFNIINCVSKEAKYIILVSEDLNKLANLN
DYIIANYGITPIITKDIKTSFSKADFIITTKDVEIIKSIPVWYINNSKIYENKSSCNINNIIYKVPWKTNLNFNPELLGA
ILCQMDKKNVEEAIRYNGIVLDKIMFNKDIVKIIR
>Mature_275_residues
MKPIIDISSNIMKDYNKNNFIFKIKDEFLTHFRGNCFIEELNLVISKVRISPNFNEKAYYKNIKRSIKYSRHKDFVLAPK
TFRFLDYYLLNSFQKELFALSVCESMKTVLRLKGKTIRNSCIVIFDAKEEYVFNIINCVSKEAKYIILVSEDLNKLANLN
DYIIANYGITPIITKDIKTSFSKADFIITTKDVEIIKSIPVWYINNSKIYENKSSCNINNIIYKVPWKTNLNFNPELLGA
ILCQMDKKNVEEAIRYNGIVLDKIMFNKDIVKIIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32247; Mature: 32247

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIIDISSNIMKDYNKNNFIFKIKDEFLTHFRGNCFIEELNLVISKVRISPNFNEKAYY
CCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCHHHHH
KNIKRSIKYSRHKDFVLAPKTFRFLDYYLLNSFQKELFALSVCESMKTVLRLKGKTIRNS
HHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
CIVIFDAKEEYVFNIINCVSKEAKYIILVSEDLNKLANLNDYIIANYGITPIITKDIKTS
EEEEEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCEEEEECCCCEEEEHHHHHC
FSKADFIITTKDVEIIKSIPVWYINNSKIYENKSSCNINNIIYKVPWKTNLNFNPELLGA
CCCCCEEEEECCHHHHHCCCEEEEECCEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHH
ILCQMDKKNVEEAIRYNGIVLDKIMFNKDIVKIIR
HHHHCCHHHHHHHHHHCCEEEEHHHHCHHHHHHCC
>Mature Secondary Structure
MKPIIDISSNIMKDYNKNNFIFKIKDEFLTHFRGNCFIEELNLVISKVRISPNFNEKAYY
CCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCHHHHH
KNIKRSIKYSRHKDFVLAPKTFRFLDYYLLNSFQKELFALSVCESMKTVLRLKGKTIRNS
HHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
CIVIFDAKEEYVFNIINCVSKEAKYIILVSEDLNKLANLNDYIIANYGITPIITKDIKTS
EEEEEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCEEEEECCCCEEEEHHHHHC
FSKADFIITTKDVEIIKSIPVWYINNSKIYENKSSCNINNIIYKVPWKTNLNFNPELLGA
CCCCCEEEEECCHHHHHCCCEEEEECCEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHH
ILCQMDKKNVEEAIRYNGIVLDKIMFNKDIVKIIR
HHHHCCHHHHHHHHHHCCEEEEHHHHCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA