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The map label for this gene is ctsR [H]

Identifier: 226950966

GI number: 226950966

Start: 4010222

End: 4010686

Strand: Reverse

Name: ctsR [H]

Synonym: CLM_3983

Alternate gene names: 226950966

Gene position: 4010686-4010222 (Counterclockwise)

Preceding gene: 226950967

Following gene: 226950965

Centisome position: 96.52

GC content: 27.1

Gene sequence:

>465_bases
ATGATATTTGTGGCCAGATTATCTGATATAATAGAGGATTTTATAAAAGAAATGTTTCAAGAAAATAACGAATCAGAATT
GCAAATAAAAAGAAATGAATTGGCTAATTATTTTAGTTGTGCACCATCTCAAATAAATTATGTCTTAACTACTAGATTTA
CAGAAGATAAGGGCTATTATATAGAAAGTAAACGAGGTGGTGGGGGTTGCATTATAATTAAGCGTATAGAATTTACTGAT
AATAAAAACCTGAAAGAGCTTATAGTAGATAGAATAGGGAATAGTATTACATACGATAATGCAATCAATATTATAGATGG
TTTAGTAGAAACCGCTTTTATAACAGAAAGAGAAGCTATTATAATGAAAATTGCTATAAACGATAGGGTATTCGGGAATA
TTGATGCAAATAAAAATATGTTAAGGGCCAATATACTAAAAAATATAATTATGGTTATAATTTAA

Upstream 100 bases:

>100_bases
TATAATGACATTATTTACCCCTATATCTATATTGAATAAAGAAAATATGTAAATTATTATATTATTAAAGTCAAAGAAAG
ACAAAGTCAGAAGAAAAGGA

Downstream 100 bases:

>100_bases
TATAAAAGTTGGGGGTGATTTTATGTTATGTGATAAATGTAATAAAAGTAATGCAACAGTTCATATAACAAAGGTTATAA
ATGGACATAAAGAAGAGGTT

Product: transciptional repressor CtsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIFVARLSDIIEDFIKEMFQENNESELQIKRNELANYFSCAPSQINYVLTTRFTEDKGYYIESKRGGGGCIIIKRIEFTD
NKNLKELIVDRIGNSITYDNAINIIDGLVETAFITEREAIIMKIAINDRVFGNIDANKNMLRANILKNIIMVII

Sequences:

>Translated_154_residues
MIFVARLSDIIEDFIKEMFQENNESELQIKRNELANYFSCAPSQINYVLTTRFTEDKGYYIESKRGGGGCIIIKRIEFTD
NKNLKELIVDRIGNSITYDNAINIIDGLVETAFITEREAIIMKIAINDRVFGNIDANKNMLRANILKNIIMVII
>Mature_154_residues
MIFVARLSDIIEDFIKEMFQENNESELQIKRNELANYFSCAPSQINYVLTTRFTEDKGYYIESKRGGGGCIIIKRIEFTD
NKNLKELIVDRIGNSITYDNAINIIDGLVETAFITEREAIIMKIAINDRVFGNIDANKNMLRANILKNIIMVII

Specific function: Negative regulator of clpC, clpB and clpP transcription by binding directly and specifically to their promoter region [H]

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008463 [H]

Pfam domain/function: PF05848 CtsR [H]

EC number: NA

Molecular weight: Translated: 17691; Mature: 17691

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVARLSDIIEDFIKEMFQENNESELQIKRNELANYFSCAPSQINYVLTTRFTEDKGYY
CEEHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCEEEEEEEEECCCCEE
IESKRGGGGCIIIKRIEFTDNKNLKELIVDRIGNSITYDNAINIIDGLVETAFITEREAI
EEECCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCEE
IMKIAINDRVFGNIDANKNMLRANILKNIIMVII
EEEEEECCEEEECCCCCCHHHHHHHHHHHHHEEC
>Mature Secondary Structure
MIFVARLSDIIEDFIKEMFQENNESELQIKRNELANYFSCAPSQINYVLTTRFTEDKGYY
CEEHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCEEEEEEEEECCCCEE
IESKRGGGGCIIIKRIEFTDNKNLKELIVDRIGNSITYDNAINIIDGLVETAFITEREAI
EEECCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCEE
IMKIAINDRVFGNIDANKNMLRANILKNIIMVII
EEEEEECCEEEECCCCCCHHHHHHHHHHHHHEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA