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The map label for this gene is nusG [H]

Identifier: 226950946

GI number: 226950946

Start: 3990598

End: 3991122

Strand: Reverse

Name: nusG [H]

Synonym: CLM_3961

Alternate gene names: 226950946

Gene position: 3991122-3990598 (Counterclockwise)

Preceding gene: 226950947

Following gene: 226950945

Centisome position: 96.05

GC content: 32.76

Gene sequence:

>525_bases
ATGTCAGAAGAAAAAGCGAAATGGTATGTGGTTCATACATATTCAGGATATGAAAATAAAGTTAAAGTTAATCTTCAAAA
AACTGTGGATAACAGAAATTTACATCACTGGATTTTTGATATACAAGTTCCTATGGAGGAACAGGTTGAAGTTAAAGATG
GTAAAAAGAAGATAACATTAAAGAAAACTTTTCCAGGATATGTATTAGTTAAAATGTTAATGACAGATGATTCATGGTAC
ATAGTTAGAAATACTAGAGGGGTAACAGGATTTGTAGGTCCGGGATCTAAGCCAGTACCTCTTACAGAAGAAGAAGTATT
GTCTATGGGAATAAAAGAAAAACAACCAGAGGTAGATGTTGAGGTTGGAGAAAATGTTAAGGTAGTATCAGGACCTTTAG
AAGGATTCCCAGCGACTATACAGGAAATTAATGTAGAAAAAGGTAAAATAAAAGCTTTAGTTAATATGTTTGGCAGGGAA
ACCCCTGTTGAACTTGATTTTAATCAGATAGAAAAACTTGATTAG

Upstream 100 bases:

>100_bases
GGAGTATTTGATTATGGATTCAACAACCTATTCAAGCTAATATTTAAGCTGTAGAAGTGAATAAAAGGAGGGAAATAGGG
ATATCCTAATCCCTGAAATT

Downstream 100 bases:

>100_bases
CTATTAAGACAATTGTTTTAATTAGTGGGAGGATTTTAATCCGTATAACCACATATAGGAGGTGTAAAATATGGCTAAAA
AAGTAGTAGGAATGATAAAA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSEEKAKWYVVHTYSGYENKVKVNLQKTVDNRNLHHWIFDIQVPMEEQVEVKDGKKKITLKKTFPGYVLVKMLMTDDSWY
IVRNTRGVTGFVGPGSKPVPLTEEEVLSMGIKEKQPEVDVEVGENVKVVSGPLEGFPATIQEINVEKGKIKALVNMFGRE
TPVELDFNQIEKLD

Sequences:

>Translated_174_residues
MSEEKAKWYVVHTYSGYENKVKVNLQKTVDNRNLHHWIFDIQVPMEEQVEVKDGKKKITLKKTFPGYVLVKMLMTDDSWY
IVRNTRGVTGFVGPGSKPVPLTEEEVLSMGIKEKQPEVDVEVGENVKVVSGPLEGFPATIQEINVEKGKIKALVNMFGRE
TPVELDFNQIEKLD
>Mature_173_residues
SEEKAKWYVVHTYSGYENKVKVNLQKTVDNRNLHHWIFDIQVPMEEQVEVKDGKKKITLKKTFPGYVLVKMLMTDDSWYI
VRNTRGVTGFVGPGSKPVPLTEEEVLSMGIKEKQPEVDVEVGENVKVVSGPLEGFPATIQEINVEKGKIKALVNMFGRET
PVELDFNQIEKLD

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=180, Percent_Identity=40.5555555555556, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 19837; Mature: 19706

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEKAKWYVVHTYSGYENKVKVNLQKTVDNRNLHHWIFDIQVPMEEQVEVKDGKKKITL
CCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCEEECCCCEEEEE
KKTFPGYVLVKMLMTDDSWYIVRNTRGVTGFVGPGSKPVPLTEEEVLSMGIKEKQPEVDV
EECCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEE
EVGENVKVVSGPLEGFPATIQEINVEKGKIKALVNMFGRETPVELDFNQIEKLD
EECCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEECHHHHCCCC
>Mature Secondary Structure 
SEEKAKWYVVHTYSGYENKVKVNLQKTVDNRNLHHWIFDIQVPMEEQVEVKDGKKKITL
CCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCEEECCCCEEEEE
KKTFPGYVLVKMLMTDDSWYIVRNTRGVTGFVGPGSKPVPLTEEEVLSMGIKEKQPEVDV
EECCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEE
EVGENVKVVSGPLEGFPATIQEINVEKGKIKALVNMFGRETPVELDFNQIEKLD
EECCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA