| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is fusA [H]
Identifier: 226950936
GI number: 226950936
Start: 3977116
End: 3979185
Strand: Reverse
Name: fusA [H]
Synonym: CLM_3951
Alternate gene names: 226950936
Gene position: 3979185-3977116 (Counterclockwise)
Preceding gene: 226950937
Following gene: 226950935
Centisome position: 95.76
GC content: 34.88
Gene sequence:
>2070_bases TTGGCGAACAAAGAATATCCATTGGCAAAATTTCGTAATATCGGGATTATGGCCCATATAGATGCGGGAAAAACTACAGC AACAGAACGTATATTATTCTATACAGGAAAAACTCATAAAATAGGTGAAACTCATGAGGGTGGAGCTACAATGGACTGGA TGGAACAAGAACAAGAAAGAGGTATAACAATTACATCTGCAGCAACAACTTGTTTTTGGAAAGACCATCAAGTAAATATA ATAGATACACCAGGACACGTAGATTTTACAGTTGAAGTTGAAAGATCTTTAAGAGTATTAGACGGTGCAGTAACAATATT AGATGCTAAAAGCGGTGTTGAACCACAAACAGAAACAGTGTGGAGACAGGCGGACAACTATAAAGTACCAAGAATGGTAT TTATAAATAAAATGGATAAATTAGGGGCAGACTTCTTAATGTCTGTAGGGACACTAAGAGAGAGATTACATGCAAACGCA GTGCCACTTCAATTACCAATAGGTGCAGAAGATTCATTTTCTGGAATTATAGATCTTGTAAAAAATGATGCTGTTATTTA TAAAGATGATTTAGGAACTGTAATGGATGAAACAGAAATTCCAGAAGATATGAAAGAAATAGCTGAAGAATACAGAACAA TGTTATTAGAAGCTGTTGCAGAAGTAGATGAAGACATAATGATGAAATACCTAGAAGGTGAAGAAATTTCTGTAGAAGAA ATAAAAACAGCTTTAAGACATGGTGTTATAGCAAATAAAATAGTACCAGTTCTTTGTGGATCAGCTTACAAAAATAAGGG TGTTCAATTATTACTAGATGCTATAGTTGAATTCATGCCTTCACCATTAGATATAGAAGATGTTAAAGGAACAGAGCCAA CAACAGGTGAAGAAATGACAAGACCAGCAGATGCAAAAGCTCCATTAGCAGCATTAGCATTTAAAATAGCTACAGATCCA TTCATTGGTAAATTAGCATTTACTAGAATTTATTCTGGAACAATGAAGAGTGGTACGTATGTATTTAACTCTAATAAGGG TAAGAGAGAAAGAATAGGAAGATTAGTTAAAATGCATGCTAATCACAGAGAAGAAGTTGACGAATTAAAAGCTGGAGAAT TAGGCGCTATAGTTGGTCTTAAAGATACAACTACAGGAGATACACTTTGTGATGATGCAAACCCAATTATACTTGAAAAC ATGGAATTCCCAGAGCCAGTTATAGATGTATCAATAGAGCCAAAAACAAAAGCTGGTCAAGAAAAAATGGGTATAGCTTT AGCAAAGCTTGCAGAAGAAGATCCAACATTTAGAACATACACAAATCAAGAAACAGGTCAAACAATTATAGCAGGTATGG GAGAACTTCATCTTGAAATAATAGTTGATAGACTTATAAGAGAATTTAAAGTTGAATGTAACGTAGGCCAACCACAAGTT GCTTACAAAGAAACTGTGAGAAAGCATGTTAAGGCTGAAGGTAAGTTTGTAAGACAATCAGGTGGACGTGGACAATACGG ACATTGTTGGATTGAAATGATGCCTACTGAAGGAGAATATGAATTTGACAATGCTATAGTTGGTGGAGCAATTCCAAAAG AATATATCCCAGCGATAGATAATGGTATTCAAGAAGCTTCACAAAGCGGTATAATTGCAGGATATCCTGTTATTAACTTT AAAGTTAAATTAGTTGATGGATCATACCATGATGTCGATTCATCAGAAATGGCCTTCAAAATTGCAGGTTCTATGGCCTT TAAAAATGCTATGTCAAAAGCAGATGCTGTGTTATTAGAACCTTCAATGAAAGTTGAAGTAGTTGTACCGGAAGAATATA TGGGTGATGTAATAGGTGACATCAACTCAAGAAGAGGTAGAATAGAAGGAATGACTCCAAGAGCAGGTGCAGAAGTAATA AGAGCCTTCGTACCACTTTCAGAAATGTTTGGATATGCTACTACATTAAGATCTAAGACTCAAGGTAGAGGAAATTATGT AATGCAATTTGATCATTATGAAGAAGTTCCAAAGAGCATTCAAGATAAAGTAATTGGAGAAAGAAAATAA
Upstream 100 bases:
>100_bases ACAAAGCTTTCGCACATTACAGATACTAATACAAAACTGTTTTGGCTGTGCCAAAACAGTTTTGTCAAATTTGAATTTGA AACGATGGGAGGAAAAGCAA
Downstream 100 bases:
>100_bases TATAATAAATATATAAACACAAAAAAGGAGGAAATAAAAATGGCAAAAGCAAAATTTGAAAGAAGTAAACCTCATGTAAA CATAGGAACAATAGGTCACG
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGGATMDWMEQEQERGITITSAATTCFWKDHQVNI IDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETVWRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANA VPLQLPIGAEDSFSGIIDLVKNDAVIYKDDLGTVMDETEIPEDMKEIAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE IKTALRHGVIANKIVPVLCGSAYKNKGVQLLLDAIVEFMPSPLDIEDVKGTEPTTGEEMTRPADAKAPLAALAFKIATDP FIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHANHREEVDELKAGELGAIVGLKDTTTGDTLCDDANPIILEN MEFPEPVIDVSIEPKTKAGQEKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV AYKETVRKHVKAEGKFVRQSGGRGQYGHCWIEMMPTEGEYEFDNAIVGGAIPKEYIPAIDNGIQEASQSGIIAGYPVINF KVKLVDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVI RAFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVIGERK
Sequences:
>Translated_689_residues MANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGGATMDWMEQEQERGITITSAATTCFWKDHQVNI IDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETVWRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANA VPLQLPIGAEDSFSGIIDLVKNDAVIYKDDLGTVMDETEIPEDMKEIAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE IKTALRHGVIANKIVPVLCGSAYKNKGVQLLLDAIVEFMPSPLDIEDVKGTEPTTGEEMTRPADAKAPLAALAFKIATDP FIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHANHREEVDELKAGELGAIVGLKDTTTGDTLCDDANPIILEN MEFPEPVIDVSIEPKTKAGQEKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV AYKETVRKHVKAEGKFVRQSGGRGQYGHCWIEMMPTEGEYEFDNAIVGGAIPKEYIPAIDNGIQEASQSGIIAGYPVINF KVKLVDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVI RAFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVIGERK >Mature_688_residues ANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGGATMDWMEQEQERGITITSAATTCFWKDHQVNII DTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETVWRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANAV PLQLPIGAEDSFSGIIDLVKNDAVIYKDDLGTVMDETEIPEDMKEIAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEEI KTALRHGVIANKIVPVLCGSAYKNKGVQLLLDAIVEFMPSPLDIEDVKGTEPTTGEEMTRPADAKAPLAALAFKIATDPF IGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHANHREEVDELKAGELGAIVGLKDTTTGDTLCDDANPIILENM EFPEPVIDVSIEPKTKAGQEKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQVA YKETVRKHVKAEGKFVRQSGGRGQYGHCWIEMMPTEGEYEFDNAIVGGAIPKEYIPAIDNGIQEASQSGIIAGYPVINFK VKLVDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVIR AFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVIGERK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=695, Percent_Identity=42.3021582733813, Blast_Score=561, Evalue=1e-160, Organism=Homo sapiens, GI19923640, Length=725, Percent_Identity=40.1379310344828, Blast_Score=495, Evalue=1e-140, Organism=Homo sapiens, GI25306287, Length=701, Percent_Identity=37.660485021398, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI25306283, Length=450, Percent_Identity=44.4444444444444, Blast_Score=340, Evalue=2e-93, Organism=Homo sapiens, GI217272892, Length=807, Percent_Identity=24.1635687732342, Blast_Score=136, Evalue=9e-32, Organism=Homo sapiens, GI217272894, Length=807, Percent_Identity=24.1635687732342, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI4503483, Length=481, Percent_Identity=25.7796257796258, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI157426893, Length=143, Percent_Identity=37.0629370629371, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI94966754, Length=139, Percent_Identity=39.568345323741, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=38.3333333333333, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=38.3333333333333, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=38.3333333333333, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI94966752, Length=68, Percent_Identity=44.1176470588235, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1789738, Length=697, Percent_Identity=59.8278335724534, Blast_Score=849, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=482, Percent_Identity=28.2157676348548, Blast_Score=163, Evalue=3e-41, Organism=Escherichia coli, GI48994988, Length=179, Percent_Identity=39.6648044692737, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788922, Length=142, Percent_Identity=38.7323943661972, Blast_Score=96, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17533571, Length=694, Percent_Identity=40.2017291066282, Blast_Score=511, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17556745, Length=723, Percent_Identity=30.1521438450899, Blast_Score=339, Evalue=3e-93, Organism=Caenorhabditis elegans, GI17552882, Length=806, Percent_Identity=22.7047146401985, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17506493, Length=480, Percent_Identity=24.7916666666667, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17557151, Length=140, Percent_Identity=38.5714285714286, Blast_Score=96, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71988819, Length=144, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988811, Length=144, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=689, Percent_Identity=41.3642960812772, Blast_Score=552, Evalue=1e-158, Organism=Saccharomyces cerevisiae, GI6322359, Length=783, Percent_Identity=33.205619412516, Blast_Score=390, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6324707, Length=474, Percent_Identity=25.7383966244726, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6320593, Length=474, Percent_Identity=25.7383966244726, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323320, Length=141, Percent_Identity=37.5886524822695, Blast_Score=97, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=37.2413793103448, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24582462, Length=696, Percent_Identity=41.6666666666667, Blast_Score=550, Evalue=1e-156, Organism=Drosophila melanogaster, GI221458488, Length=724, Percent_Identity=33.5635359116022, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI24585711, Length=484, Percent_Identity=24.3801652892562, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI24585713, Length=484, Percent_Identity=24.3801652892562, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI24585709, Length=484, Percent_Identity=24.3801652892562, Blast_Score=106, Evalue=7e-23, Organism=Drosophila melanogaster, GI78706572, Length=137, Percent_Identity=37.956204379562, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI28574573, Length=142, Percent_Identity=35.9154929577465, Blast_Score=89, Evalue=2e-17, Organism=Drosophila melanogaster, GI21357743, Length=137, Percent_Identity=35.036496350365, Blast_Score=76, Evalue=7e-14,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76313; Mature: 76182
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGGATMDWMEQEQER CCCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHC GITITSAATTCFWKDHQVNIIDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETV CEEEEECCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCEEEEEECCCCCCCHHHHH WRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANAVPLQLPIGAEDSFSGIIDLV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHH KNDAVIYKDDLGTVMDETEIPEDMKEIAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE CCCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHH IKTALRHGVIANKIVPVLCGSAYKNKGVQLLLDAIVEFMPSPLDIEDVKGTEPTTGEEMT HHHHHHHCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC RPADAKAPLAALAFKIATDPFIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHA CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHC NHREEVDELKAGELGAIVGLKDTTTGDTLCDDANPIILENMEFPEPVIDVSIEPKTKAGQ CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCH EKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV HHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCH AYKETVRKHVKAEGKFVRQSGGRGQYGHCWIEMMPTEGEYEFDNAIVGGAIPKEYIPAID HHHHHHHHHHHHCCHHEECCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHH NGIQEASQSGIIAGYPVINFKVKLVDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLE HHHHHHHCCCCEEECEEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCEEEEC PSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVIRAFVPLSEMFGYATTLRSKT CCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCC QGRGNYVMQFDHYEEVPKSIQDKVIGERK CCCCCEEEEECCHHHHHHHHHHHHCCCCC >Mature Secondary Structure ANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGGATMDWMEQEQER CCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHC GITITSAATTCFWKDHQVNIIDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETV CEEEEECCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCEEEEEECCCCCCCHHHHH WRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANAVPLQLPIGAEDSFSGIIDLV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHH KNDAVIYKDDLGTVMDETEIPEDMKEIAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE CCCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHH IKTALRHGVIANKIVPVLCGSAYKNKGVQLLLDAIVEFMPSPLDIEDVKGTEPTTGEEMT HHHHHHHCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC RPADAKAPLAALAFKIATDPFIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHA CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHC NHREEVDELKAGELGAIVGLKDTTTGDTLCDDANPIILENMEFPEPVIDVSIEPKTKAGQ CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCH EKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV HHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCH AYKETVRKHVKAEGKFVRQSGGRGQYGHCWIEMMPTEGEYEFDNAIVGGAIPKEYIPAID HHHHHHHHHHHHCCHHEECCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHH NGIQEASQSGIIAGYPVINFKVKLVDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLE HHHHHHHCCCCEEECEEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCEEEEC PSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVIRAFVPLSEMFGYATTLRSKT CCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCC QGRGNYVMQFDHYEEVPKSIQDKVIGERK CCCCCEEEEECCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA