| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is glmM [H]
Identifier: 226950872
GI number: 226950872
Start: 3928342
End: 3929691
Strand: Reverse
Name: glmM [H]
Synonym: CLM_3886
Alternate gene names: 226950872
Gene position: 3929691-3928342 (Counterclockwise)
Preceding gene: 226950873
Following gene: 226950871
Centisome position: 94.57
GC content: 31.56
Gene sequence:
>1350_bases ATGGGTAGAATGTTCGGAACAGATGGAGTCAGAGGAATAGCTAATAAGGAATTAACAGCAGACTTAGCATATAAATTAGG TAAAGCAGGAGCCTTTATATTAACAGAAGGAACACATAGACCTAAGATACTTGTAGGTATGGATACAAGAATATCAGGGG ACATGCTAGAGAGTGCTTTAGTAGCAGGTATATTATCTGTGGGAGCAGAAGCTATTTGTGTAGGTGTAATACCAACACCA GCAATAGCTTACTTAACAAGAAAATATAATGCGGATGCAGGGGTTGTTATTTCAGCATCACATAATCCAGTAGAATACAA TGGTATAAAGTTTTTTAATAAAAATGGATATAAATTATCCGATGAATTAGAAGATAGTATACAAGCATTAATAAGAGATG ATTTTAAGGATGTTCCAGTTTTAACTGGAGAAAATATAGGAAGAAAGATTGAAGAAGATGGAGAGGCTATAAGAGATTAC ATAGATTTTGCTAAATCAACTATAAAGGGTGATTTGAAAGGATTAAAAGTAGCTTTAGATTGTGCTAATGGAGCATCATA TATAACATCTGTAGAAGCTTTTAAAGAATTGGGAGCAGAAGTTCATGTTATAAACAATAAACCTGATGGTATAAATATAA ATAGAAACTCTGGCTCAACACACCCAGAAGATCTTATGGAGTATGTAGTTAAAAATAATTGCCACATGGGATTAGCTTTT GATGGAGATGCGGATAGATGTCTAGCCATAGATGAAAAAGGTAATTTGATAAATGGAGACTTTATATTAGCCATTTGTGG TAAGGAATTAAAAAAACAAGGTAGATTAAAGAAAAATACAATAGTAGTTACTGTAATGAGTAATCTTGGATTAGATATAG CTATGAAAAAAGAAGAAATAAATACTATAAAAACAAAAGTTGGAGATAGATATGTCCTAGAAGAAATGCTTAAAAATGAT TATGCAATAGGTGGAGAACAATCAGGACATATTATATTCTCAGATTATAACACTACAGGGGATGGACTTGTAACTGCTCT ACAATTAGCTCATATAGTAAAAGAAAGTGGTAAGACTTTTTCAGAACTATGTTCTATAATGAAAGAACTACCACAAGTTT TAGTTAATGCTAAAGTTTCTAATGATCAAAAAGATATTTATTTGAAGGATGAAGAAATAAAATCTGAAATAGATACAATT ACAAAAAATTTAGATGGCTCAGGAAGAGTGCTTATAAGACCTTCTGGTACAGAGCCTTTAGTAAGAGTAATGCTTGAAGG GGAAAACCAAAAGGAAATTGATAAATTAGCACATGGCTTAGCTAAATTAATAGAGAATAAAGTAAAATAA
Upstream 100 bases:
>100_bases ACTGGCTTTTTATATTTTTCAATTATGTTTCCTATTGTTAGAATTAGTAAACTATAATATAATATCTATGTGTATTTAAA AAATAGGAGTGATGAATTAC
Downstream 100 bases:
>100_bases TAGGATTAATTTATATTTTTAAAACATAAGGGTAATTTATAATTATTAGGTTAATTATAAATTACCCTTATGTTTTTTAT TATAATAAATAAAATTAAAA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY IDFAKSTIKGDLKGLKVALDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVSNDQKDIYLKDEEIKSEIDTI TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK
Sequences:
>Translated_449_residues MGRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY IDFAKSTIKGDLKGLKVALDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVSNDQKDIYLKDEEIKSEIDTI TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK >Mature_448_residues GRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTPA IAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYI DFAKSTIKGDLKGLKVALDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAFD GDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKNDY AIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVSNDQKDIYLKDEEIKSEIDTIT KNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=43.0493273542601, Blast_Score=335, Evalue=4e-93, Organism=Escherichia coli, GI1788361, Length=450, Percent_Identity=30.8888888888889, Blast_Score=159, Evalue=4e-40, Organism=Drosophila melanogaster, GI17864244, Length=321, Percent_Identity=26.1682242990654, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 48894; Mature: 48762
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESAL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHH VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVALD HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF ECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEI CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH SELCSIMKELPQVLVNAKVSNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL HHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH VRVMLEGENQKEIDKLAHGLAKLIENKVK HHEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESAL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHH VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVALD HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF ECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEI CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH SELCSIMKELPQVLVNAKVSNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL HHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH VRVMLEGENQKEIDKLAHGLAKLIENKVK HHEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA