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The map label for this gene is zntR [C]

Identifier: 226950859

GI number: 226950859

Start: 3916117

End: 3916911

Strand: Reverse

Name: zntR [C]

Synonym: CLM_3872

Alternate gene names: 226950859

Gene position: 3916911-3916117 (Counterclockwise)

Preceding gene: 226950860

Following gene: 226950856

Centisome position: 94.26

GC content: 23.14

Gene sequence:

>795_bases
ATGTATACAATTGGACAGTTAGCATTAATATTGAAAATATCAACAAGAACCCTTAGACATTATGACGATATTGGTTTATT
GAAGCCTTATTATATTAATGAGGAAAATGGTTATAGATATTATGAACAAGAGCAACTTGGATTAGCTAGAAATATAATAA
AACTTAAAGAATATGGATTAACTCTTGAAGAAATAAAAGAAATAATAGCTAATAGTAATATAAATAGTTATGAAATTATA
AAAAAGAGATTAAATATTATAGAAAATGAAATAGGTAAATTAACAGCAATGAGAGATAATTTATATAAGATGTTAAAAGA
AAATAAAGTAATTAAAAGGGTAGAATTTAATTATAAAATACATGAAGTTGAAGTTGTTAAATTAGATAATATAAATGTGA
TAAGTAAAAAATGTACAATTAATATTAAAGATATAGGGAAGGTTGTAGGTTCTCTTTATGAATTAATAAATAAGAATGGA
TTAAGAATAAAAGGGCCACATATAGTAAAATATTTTGAAAAGGAATATGATCCTGAAAATGCAGATGTTGAGATATGTAT
TCCAATAGAAAGTAGAAAAGAAGGAAAACCGAAAATTAATGTTATACCAAAGGGAAGATATGTAACTTCAAAAGCCAATT
CTATAAGTGAAAAGGGAAATGCTTATGAAAGCATAATAAATTGGATCCAATCTAATAATTATAAAATTAATGGAAATCCT
TTTGAAGAATATGCTGTTAATTATGAAACTGGATTATTTAATATAAATATATATTACCCTATTGAGAATTATTAA

Upstream 100 bases:

>100_bases
TGGAATTGATATTTAAATTTATTCAATATGGATATGTGCCAGAACTTTCAAAGAAAATAAAAATTGCTATGAATTATATG
ATTTTGAGGTGAATAGATAT

Downstream 100 bases:

>100_bases
GAAAAACAGGTATCAGTAAATAGAAAAGAATGATAGAATAGAAAAATTTATAGGAGAAAAAATTTTCAGTATGAAAATGA
ATTAATTAGATATTTAAAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MerR Family; MerR-Family Transcriptional Regulator; Multidrug-Efflux Transporter 2 Regulator; Regulator Of Efflux Transporter; Multidrug ABC Transporter; Transcriptional Regulator Merr Family; Bacterial Transcription Activator; DeoR Family Transcriptional Regulator; Multidrug-Efflux Transporter Regulator

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MYTIGQLALILKISTRTLRHYDDIGLLKPYYINEENGYRYYEQEQLGLARNIIKLKEYGLTLEEIKEIIANSNINSYEII
KKRLNIIENEIGKLTAMRDNLYKMLKENKVIKRVEFNYKIHEVEVVKLDNINVISKKCTINIKDIGKVVGSLYELINKNG
LRIKGPHIVKYFEKEYDPENADVEICIPIESRKEGKPKINVIPKGRYVTSKANSISEKGNAYESIINWIQSNNYKINGNP
FEEYAVNYETGLFNINIYYPIENY

Sequences:

>Translated_264_residues
MYTIGQLALILKISTRTLRHYDDIGLLKPYYINEENGYRYYEQEQLGLARNIIKLKEYGLTLEEIKEIIANSNINSYEII
KKRLNIIENEIGKLTAMRDNLYKMLKENKVIKRVEFNYKIHEVEVVKLDNINVISKKCTINIKDIGKVVGSLYELINKNG
LRIKGPHIVKYFEKEYDPENADVEICIPIESRKEGKPKINVIPKGRYVTSKANSISEKGNAYESIINWIQSNNYKINGNP
FEEYAVNYETGLFNINIYYPIENY
>Mature_264_residues
MYTIGQLALILKISTRTLRHYDDIGLLKPYYINEENGYRYYEQEQLGLARNIIKLKEYGLTLEEIKEIIANSNINSYEII
KKRLNIIENEIGKLTAMRDNLYKMLKENKVIKRVEFNYKIHEVEVVKLDNINVISKKCTINIKDIGKVVGSLYELINKNG
LRIKGPHIVKYFEKEYDPENADVEICIPIESRKEGKPKINVIPKGRYVTSKANSISEKGNAYESIINWIQSNNYKINGNP
FEEYAVNYETGLFNINIYYPIENY

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30849; Mature: 30849

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIGQLALILKISTRTLRHYDDIGLLKPYYINEENGYRYYEQEQLGLARNIIKLKEYGL
CCCHHHEEEEEEEHHHHHHHHCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHCC
TLEEIKEIIANSNINSYEIIKKRLNIIENEIGKLTAMRDNLYKMLKENKVIKRVEFNYKI
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
HEVEVVKLDNINVISKKCTINIKDIGKVVGSLYELINKNGLRIKGPHIVKYFEKEYDPEN
EEEEEEEECCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCC
ADVEICIPIESRKEGKPKINVIPKGRYVTSKANSISEKGNAYESIINWIQSNNYKINGNP
CCEEEEEEECCCCCCCCEEEEEECCCEEECCCHHHHHCCHHHHHHHHHHHCCCEEECCCC
FEEYAVNYETGLFNINIYYPIENY
HHHHEEEEECCEEEEEEEEECCCC
>Mature Secondary Structure
MYTIGQLALILKISTRTLRHYDDIGLLKPYYINEENGYRYYEQEQLGLARNIIKLKEYGL
CCCHHHEEEEEEEHHHHHHHHCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHCC
TLEEIKEIIANSNINSYEIIKKRLNIIENEIGKLTAMRDNLYKMLKENKVIKRVEFNYKI
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
HEVEVVKLDNINVISKKCTINIKDIGKVVGSLYELINKNGLRIKGPHIVKYFEKEYDPEN
EEEEEEEECCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCC
ADVEICIPIESRKEGKPKINVIPKGRYVTSKANSISEKGNAYESIINWIQSNNYKINGNP
CCEEEEEEECCCCCCCCEEEEEECCCEEECCCHHHHHCCHHHHHHHHHHHCCCEEECCCC
FEEYAVNYETGLFNINIYYPIENY
HHHHEEEEECCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA