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The map label for this gene is yjeF [C]

Identifier: 226950850

GI number: 226950850

Start: 3906493

End: 3907995

Strand: Reverse

Name: yjeF [C]

Synonym: CLM_3862

Alternate gene names: 226950850

Gene position: 3907995-3906493 (Counterclockwise)

Preceding gene: 226950851

Following gene: 226950849

Centisome position: 94.05

GC content: 28.61

Gene sequence:

>1503_bases
ATGAGAATAACTTCTTCGGAAAATTTTAGAAAGATGGACAATTATTCCATAGAGAATATAGGAATACCAAGTATTGTGCT
AATGGAAAATGCAGCATTAAAGATTGTATCTAATATAGATTTACAACTAAATAATAGATTTGTTATAGTTTGTGGAAAAG
GTAACAATGGGGGAGATGGATTAGCTGTAGCAAGACATTTACATTGTTTAAATAAAGAAGTAGAAGTATTTATAATTGAG
AAGAGTAAAGATGGAACTAAGGATTTTAAAATAAATTACAATATATTAAAAAACATGAATTTAAATATTAAAACTATAAG
AGATTATGAAGATTTAGATTATTTAAGAGAAAGTATAATGAAAAGTGATATGGTTCTAGATGCTATTTTTGGCATAGGCC
TTAGTAGAAAAATAGAGGGAATACATAAGGATACTATATCTGTAATAAATGAAAATAGCAAAAGTACATTGGCTATAGAT
GTGCCTTCTGGATTAAATGCTAATACGGGTGAAATAGAAGGGGTTTGTATAGAGGCTAATACCACAGTTTCTTTTGAAAT
GTATAAAGAGGGGTTTTTAGCTTATTATAGGGATAAATATTTAGGAAATATCATAATTGAAAATATAGGAATTCCTAGGG
AAGCTTTGGATTTGTTTTCTAATGATCTTTATATTATTGATAAGTATATGTTTAAAAATAATTTTAAAGAAAGAAATAAA
TACGCCCACAAAGGCGATTTTGGTAAGGCATTATTCATAGCTGGAAGTAAAGGATTTTCGGGAGCAGCTTACCTGTGCAC
AGAAGCAGCGGTTAAAAGTGGAACAGGACTTGTAACTTTAGCTACATCTAATGATATCCAAAATATATTAAGCTCTAAAT
TAGAAGAAGCTATGACTATAAGTTATGAGGATTATAAAGATGTTAAAAATATTATGGTAAAAAGCAGTTGTATAGCAATA
GGTCCAGGCATGGGTAAAAATAATAATACAGAGGAACTGTTAAGAAAAATAATAAGAGATTATAATAAAACCATGGTTAT
AGATGCTGATGGTATAAATGTTTTAGAAAATAATTTGGATATAATAAAAAAAGCAAGAGGAGAAATAGTTTTAACTCCAC
ATTTAGGGGAATTCTCAAGAATAACAGGTTATGACATAGATTATATAAAAGAAAATAGATTGAAATTAGCTAAGGAATTT
GCTAAAGAAAATAAAATTATATTACTCTTAAAAGGATATAATACCATAATTACAAATGGTAAAGAAGTATTTGTAAATTC
TACAGGAAATAGTGCTATGGCATCTGGAGGTATGGGAGATTGTCTAACAGGAATAATAACATCTTTTATAGCTCAGGGAT
ATGATCCTTTAGAGGCTACTTGTCTTGCGGCATATTTACATGGATATTGTGGTGAGAAATTATCTTCAAAAATGTTTTGT
GTAAATGCTACTCATGTGCTAGATTATATATCTTTTGCTATAAAGGAATTACAGTACACATAG

Upstream 100 bases:

>100_bases
AAGATATAATAAGAAAAATATCCCAATCCTATAAAATTCATTTGAGCATATCTCATGAAAAAGAGTATGCTATAGCTTAT
GCTTTATTGGAGGTATTTAT

Downstream 100 bases:

>100_bases
CTAAATTAACATTCTATTCAGCTTAGAAATTTTATAATAGTATAGCTGAAGCATATAATTATGTAAAAGAATATAGCTAA
TTTGATAAGGCTTCTCTTAA

Product: carbohydrate kinase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MRITSSENFRKMDNYSIENIGIPSIVLMENAALKIVSNIDLQLNNRFVIVCGKGNNGGDGLAVARHLHCLNKEVEVFIIE
KSKDGTKDFKINYNILKNMNLNIKTIRDYEDLDYLRESIMKSDMVLDAIFGIGLSRKIEGIHKDTISVINENSKSTLAID
VPSGLNANTGEIEGVCIEANTTVSFEMYKEGFLAYYRDKYLGNIIIENIGIPREALDLFSNDLYIIDKYMFKNNFKERNK
YAHKGDFGKALFIAGSKGFSGAAYLCTEAAVKSGTGLVTLATSNDIQNILSSKLEEAMTISYEDYKDVKNIMVKSSCIAI
GPGMGKNNNTEELLRKIIRDYNKTMVIDADGINVLENNLDIIKKARGEIVLTPHLGEFSRITGYDIDYIKENRLKLAKEF
AKENKIILLLKGYNTIITNGKEVFVNSTGNSAMASGGMGDCLTGIITSFIAQGYDPLEATCLAAYLHGYCGEKLSSKMFC
VNATHVLDYISFAIKELQYT

Sequences:

>Translated_500_residues
MRITSSENFRKMDNYSIENIGIPSIVLMENAALKIVSNIDLQLNNRFVIVCGKGNNGGDGLAVARHLHCLNKEVEVFIIE
KSKDGTKDFKINYNILKNMNLNIKTIRDYEDLDYLRESIMKSDMVLDAIFGIGLSRKIEGIHKDTISVINENSKSTLAID
VPSGLNANTGEIEGVCIEANTTVSFEMYKEGFLAYYRDKYLGNIIIENIGIPREALDLFSNDLYIIDKYMFKNNFKERNK
YAHKGDFGKALFIAGSKGFSGAAYLCTEAAVKSGTGLVTLATSNDIQNILSSKLEEAMTISYEDYKDVKNIMVKSSCIAI
GPGMGKNNNTEELLRKIIRDYNKTMVIDADGINVLENNLDIIKKARGEIVLTPHLGEFSRITGYDIDYIKENRLKLAKEF
AKENKIILLLKGYNTIITNGKEVFVNSTGNSAMASGGMGDCLTGIITSFIAQGYDPLEATCLAAYLHGYCGEKLSSKMFC
VNATHVLDYISFAIKELQYT
>Mature_500_residues
MRITSSENFRKMDNYSIENIGIPSIVLMENAALKIVSNIDLQLNNRFVIVCGKGNNGGDGLAVARHLHCLNKEVEVFIIE
KSKDGTKDFKINYNILKNMNLNIKTIRDYEDLDYLRESIMKSDMVLDAIFGIGLSRKIEGIHKDTISVINENSKSTLAID
VPSGLNANTGEIEGVCIEANTTVSFEMYKEGFLAYYRDKYLGNIIIENIGIPREALDLFSNDLYIIDKYMFKNNFKERNK
YAHKGDFGKALFIAGSKGFSGAAYLCTEAAVKSGTGLVTLATSNDIQNILSSKLEEAMTISYEDYKDVKNIMVKSSCIAI
GPGMGKNNNTEELLRKIIRDYNKTMVIDADGINVLENNLDIIKKARGEIVLTPHLGEFSRITGYDIDYIKENRLKLAKEF
AKENKIILLLKGYNTIITNGKEVFVNSTGNSAMASGGMGDCLTGIITSFIAQGYDPLEATCLAAYLHGYCGEKLSSKMFC
VNATHVLDYISFAIKELQYT

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=229, Percent_Identity=24.8908296943231, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI1790609, Length=441, Percent_Identity=29.9319727891156, Blast_Score=201, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17554656, Length=223, Percent_Identity=26.0089686098655, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322698, Length=236, Percent_Identity=24.1525423728814, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 55588; Mature: 55588

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITSSENFRKMDNYSIENIGIPSIVLMENAALKIVSNIDLQLNNRFVIVCGKGNNGGDG
CCCCCCCCCHHCCCCCCCCCCCCEEEEECCCEEEEEECCCEEECCEEEEEEECCCCCCCH
LAVARHLHCLNKEVEVFIIEKSKDGTKDFKINYNILKNMNLNIKTIRDYEDLDYLRESIM
HHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHH
KSDMVLDAIFGIGLSRKIEGIHKDTISVINENSKSTLAIDVPSGLNANTGEIEGVCIEAN
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECC
TTVSFEMYKEGFLAYYRDKYLGNIIIENIGIPREALDLFSNDLYIIDKYMFKNNFKERNK
CEEEEHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCEEEEEHHHHHCCHHHHHC
YAHKGDFGKALFIAGSKGFSGAAYLCTEAAVKSGTGLVTLATSNDIQNILSSKLEEAMTI
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHEE
SYEDYKDVKNIMVKSSCIAIGPGMGKNNNTEELLRKIIRDYNKTMVIDADGINVLENNLD
CCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHCCHH
IIKKARGEIVLTPHLGEFSRITGYDIDYIKENRLKLAKEFAKENKIILLLKGYNTIITNG
HHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECC
KEVFVNSTGNSAMASGGMGDCLTGIITSFIAQGYDPLEATCLAAYLHGYCGEKLSSKMFC
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
VNATHVLDYISFAIKELQYT
EEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRITSSENFRKMDNYSIENIGIPSIVLMENAALKIVSNIDLQLNNRFVIVCGKGNNGGDG
CCCCCCCCCHHCCCCCCCCCCCCEEEEECCCEEEEEECCCEEECCEEEEEEECCCCCCCH
LAVARHLHCLNKEVEVFIIEKSKDGTKDFKINYNILKNMNLNIKTIRDYEDLDYLRESIM
HHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHH
KSDMVLDAIFGIGLSRKIEGIHKDTISVINENSKSTLAIDVPSGLNANTGEIEGVCIEAN
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECC
TTVSFEMYKEGFLAYYRDKYLGNIIIENIGIPREALDLFSNDLYIIDKYMFKNNFKERNK
CEEEEHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCEEEEEHHHHHCCHHHHHC
YAHKGDFGKALFIAGSKGFSGAAYLCTEAAVKSGTGLVTLATSNDIQNILSSKLEEAMTI
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHEE
SYEDYKDVKNIMVKSSCIAIGPGMGKNNNTEELLRKIIRDYNKTMVIDADGINVLENNLD
CCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHCCHH
IIKKARGEIVLTPHLGEFSRITGYDIDYIKENRLKLAKEFAKENKIILLLKGYNTIITNG
HHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECC
KEVFVNSTGNSAMASGGMGDCLTGIITSFIAQGYDPLEATCLAAYLHGYCGEKLSSKMFC
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
VNATHVLDYISFAIKELQYT
EEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]