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The map label for this gene is 226950809

Identifier: 226950809

GI number: 226950809

Start: 3862932

End: 3863336

Strand: Reverse

Name: 226950809

Synonym: CLM_3820

Alternate gene names: NA

Gene position: 3863336-3862932 (Counterclockwise)

Preceding gene: 226950810

Following gene: 226950807

Centisome position: 92.97

GC content: 38.27

Gene sequence:

>405_bases
ATGGATATTTGGGAAGAAATGTATAAGAAAGCGAGAATGGTTCAGAATGGAAGAGAGATTTCTCCATTCATAGAAGCCGG
TGGCGTTGCTGCTGCAATTTTAACTAAAAAAGGTAATGTTTATGTTGGTGTTTGTATTGACACCGCGAGTACTCTAGGAA
TGTGTGCGGAGAGAAATGCGATTGCTAACATGATTACAAATGGAGAAAGTCAAATAGATAAAATCGTAGCGGTCATGCCC
GATGGTAAAGTTGGTTCCCCCTGTGGTGCTTGCAGAGAATATATGATGCAGCTAGACTGTGAAAGCGGTGAGATTGAAAT
TTTGCTTGATCTTGAAACTAAAAAAACGGTTAAATTAAAAGAACTCATTCCACATTGGTGGGGATATGACAGATTTAATT
TATAA

Upstream 100 bases:

>100_bases
AAGTCACTAAGAATTGAATAAATCATTTCAACCATACTTGGAAAAGGCGTCTGCTATTTTTAGGAAACAACCTGACAATA
CTTAAAGGAGTGATAGGATT

Downstream 100 bases:

>100_bases
ACGTTGATAAGCAAATTCCAGTAAATTGAGCAGACTAACTAGTGTAAAAATAGGAATTTGAAGGTAAGGTTTATATGAAC
TAAAAGCTGGTTCTAATAGC

Product: cytidine/deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: Cytidine/Deoxycytidylate Deaminase Family Protein; Cytidine/Deoxycytidylate Deaminase; CMP/DCMP Deaminase

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDIWEEMYKKARMVQNGREISPFIEAGGVAAAILTKKGNVYVGVCIDTASTLGMCAERNAIANMITNGESQIDKIVAVMP
DGKVGSPCGACREYMMQLDCESGEIEILLDLETKKTVKLKELIPHWWGYDRFNL

Sequences:

>Translated_134_residues
MDIWEEMYKKARMVQNGREISPFIEAGGVAAAILTKKGNVYVGVCIDTASTLGMCAERNAIANMITNGESQIDKIVAVMP
DGKVGSPCGACREYMMQLDCESGEIEILLDLETKKTVKLKELIPHWWGYDRFNL
>Mature_134_residues
MDIWEEMYKKARMVQNGREISPFIEAGGVAAAILTKKGNVYVGVCIDTASTLGMCAERNAIANMITNGESQIDKIVAVMP
DGKVGSPCGACREYMMQLDCESGEIEILLDLETKKTVKLKELIPHWWGYDRFNL

Specific function: Unknown

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14879; Mature: 14879

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIWEEMYKKARMVQNGREISPFIEAGGVAAAILTKKGNVYVGVCIDTASTLGMCAERNA
CCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHH
IANMITNGESQIDKIVAVMPDGKVGSPCGACREYMMQLDCESGEIEILLDLETKKTVKLK
HHHHHCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHH
ELIPHWWGYDRFNL
HHHHHHCCCCCCCC
>Mature Secondary Structure
MDIWEEMYKKARMVQNGREISPFIEAGGVAAAILTKKGNVYVGVCIDTASTLGMCAERNA
CCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHH
IANMITNGESQIDKIVAVMPDGKVGSPCGACREYMMQLDCESGEIEILLDLETKKTVKLK
HHHHHCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHH
ELIPHWWGYDRFNL
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA