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The map label for this gene is 226950730

Identifier: 226950730

GI number: 226950730

Start: 3758322

End: 3759212

Strand: Reverse

Name: 226950730

Synonym: CLM_3739

Alternate gene names: NA

Gene position: 3759212-3758322 (Counterclockwise)

Preceding gene: 226950731

Following gene: 226950729

Centisome position: 90.47

GC content: 32.21

Gene sequence:

>891_bases
ATGTACAAAATATTAGAAAAGAAAAATATTGCACCTAGTATATTTCTAATGAAAATTGAAGCACCAAGAGTAGCAAAGTC
AGCAAAGCCAGGACAATTTGTTATAGTCAAAATGGACGAAAAAGGAGAAAGAATACCTCTTACTATATGTGATTATGATA
AAGAAGAGGGTAGTGTAACTATTGTCATTCAAGCTATAGGTTCTTCAACAAAAAAAATGGATTCTTTTAAAGAAGGAGAT
AGCTTTAGAGATTTTGTAGGACCATTGGGACAACCTTCAGATTTTGTAAATGAAAATTTAGATGATATAAAGAAAAAGAA
AATAGTGTTTATAGCAGGAGGGCTTGGTGCGGCACCAGTATATCCACAAATAAAATGGCTTAGTGATCATGGAATAGAAG
CAGATGTTATTATTGGATGTAAATCAAAAGAACATTTAATATTAGAGGAAGAAATGAAGAAAGTAGCAGGTAATGTTTAT
GTGGCTACAGATGATGGTTCTTACGGATATAAAGGGCTTGTAACTAATTTATTAAAAGACTTAATTGATAAAGAAGGAAA
AACCTATAATCATGTAGTGGCAATAGGCCCTATGATTATGATGAAATTTGTAACTTTACTTACAAAGGAATACAACATAA
AAACTATAGTAAGTTTAAACACTCTAATGGTAGATGGAACAGGTATGTGTGGGGCATGTAGGGTAACTGTTGATGGACAA
ACTAAGTTTGCTTGTGTAGATGGCCCAGAATTTGATGGACATTTAGTAGATTTTGAAGAGGCTATTAGAAGACAACAAAT
GTATAAAACTGAAGAAGGAAAGAAATTATTAGAAGATCAAGAAAAAGCAGAAGGACATGTATGCCATGTAGGATTGGATG
GTGATAAATAA

Upstream 100 bases:

>100_bases
GTATAAGCATATACAATTTATTTAATTAGGATAAAAAAATATATAATTATGTTATAATTATATTGTAAATAAAGAATATA
AATACGGGGGAATAATTATT

Downstream 100 bases:

>100_bases
TGGATAGAATGAAAAGGGTGTCAGTAAAAGAACAAGATCCTAATAAGAGAATTACAAACTTTGATGAGGTTTGTTTAGGA
TATACAGAAGAAGACGCTAT

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MYKILEKKNIAPSIFLMKIEAPRVAKSAKPGQFVIVKMDEKGERIPLTICDYDKEEGSVTIVIQAIGSSTKKMDSFKEGD
SFRDFVGPLGQPSDFVNENLDDIKKKKIVFIAGGLGAAPVYPQIKWLSDHGIEADVIIGCKSKEHLILEEEMKKVAGNVY
VATDDGSYGYKGLVTNLLKDLIDKEGKTYNHVVAIGPMIMMKFVTLLTKEYNIKTIVSLNTLMVDGTGMCGACRVTVDGQ
TKFACVDGPEFDGHLVDFEEAIRRQQMYKTEEGKKLLEDQEKAEGHVCHVGLDGDK

Sequences:

>Translated_296_residues
MYKILEKKNIAPSIFLMKIEAPRVAKSAKPGQFVIVKMDEKGERIPLTICDYDKEEGSVTIVIQAIGSSTKKMDSFKEGD
SFRDFVGPLGQPSDFVNENLDDIKKKKIVFIAGGLGAAPVYPQIKWLSDHGIEADVIIGCKSKEHLILEEEMKKVAGNVY
VATDDGSYGYKGLVTNLLKDLIDKEGKTYNHVVAIGPMIMMKFVTLLTKEYNIKTIVSLNTLMVDGTGMCGACRVTVDGQ
TKFACVDGPEFDGHLVDFEEAIRRQQMYKTEEGKKLLEDQEKAEGHVCHVGLDGDK
>Mature_296_residues
MYKILEKKNIAPSIFLMKIEAPRVAKSAKPGQFVIVKMDEKGERIPLTICDYDKEEGSVTIVIQAIGSSTKKMDSFKEGD
SFRDFVGPLGQPSDFVNENLDDIKKKKIVFIAGGLGAAPVYPQIKWLSDHGIEADVIIGCKSKEHLILEEEMKKVAGNVY
VATDDGSYGYKGLVTNLLKDLIDKEGKTYNHVVAIGPMIMMKFVTLLTKEYNIKTIVSLNTLMVDGTGMCGACRVTVDGQ
TKFACVDGPEFDGHLVDFEEAIRRQQMYKTEEGKKLLEDQEKAEGHVCHVGLDGDK

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 32763; Mature: 32763

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKILEKKNIAPSIFLMKIEAPRVAKSAKPGQFVIVKMDEKGERIPLTICDYDKEEGSVT
CCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEE
IVIQAIGSSTKKMDSFKEGDSFRDFVGPLGQPSDFVNENLDDIKKKKIVFIAGGLGAAPV
EEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHCCCHHHHHHEEEEEEECCCCCCCC
YPQIKWLSDHGIEADVIIGCKSKEHLILEEEMKKVAGNVYVATDDGSYGYKGLVTNLLKD
CCCEEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH
LIDKEGKTYNHVVAIGPMIMMKFVTLLTKEYNIKTIVSLNTLMVDGTGMCGACRVTVDGQ
HHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEEEECCC
TKFACVDGPEFDGHLVDFEEAIRRQQMYKTEEGKKLLEDQEKAEGHVCHVGLDGDK
EEEEEECCCCCCCEEECHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure
MYKILEKKNIAPSIFLMKIEAPRVAKSAKPGQFVIVKMDEKGERIPLTICDYDKEEGSVT
CCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEE
IVIQAIGSSTKKMDSFKEGDSFRDFVGPLGQPSDFVNENLDDIKKKKIVFIAGGLGAAPV
EEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHCCCHHHHHHEEEEEEECCCCCCCC
YPQIKWLSDHGIEADVIIGCKSKEHLILEEEMKKVAGNVYVATDDGSYGYKGLVTNLLKD
CCCEEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH
LIDKEGKTYNHVVAIGPMIMMKFVTLLTKEYNIKTIVSLNTLMVDGTGMCGACRVTVDGQ
HHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEEEECCC
TKFACVDGPEFDGHLVDFEEAIRRQQMYKTEEGKKLLEDQEKAEGHVCHVGLDGDK
EEEEEECCCCCCCEEECHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA