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The map label for this gene is yraQ [C]

Identifier: 226950684

GI number: 226950684

Start: 3702732

End: 3703823

Strand: Reverse

Name: yraQ [C]

Synonym: CLM_3669

Alternate gene names: 226950684

Gene position: 3703823-3702732 (Counterclockwise)

Preceding gene: 226950685

Following gene: 226950683

Centisome position: 89.14

GC content: 30.4

Gene sequence:

>1092_bases
ATGTTTATCTATTACATAAAAAAAATAGTGTTAACCTCAATAAATTTATTAAATGGTGCATCTACCTGGCTTATATTTAG
TTTTATATTAGCTGGGTTATTACATAATATTTTAGCACCAGATAAGTTTCAAAAAATGTTAGGTAATAAAAAAATTTCAT
CTCTAATTAAAGCAACTTTATCTGGAATGTTGCTCCCTATATGTAGTTGTGGTGTTATACCTTTAGGATTAAGTCTTTAT
TATTCTGGTGCCTATTTAGGACCTACATTAGCATTTATAGCATCTACACCTATAATAAATCCTATTGCTGTTTTTTTATC
CTATGGTCTTTTAGGACCTAAAATAGCTACTATATACTTAGTAGTAGGTTTTACAGTACCATTAATAATTGGAGCAATAG
GGAATAAATTAGGGGGACCTGAACTAAAAGCCCCTGGAGTAGAAGAACAAATTCAAAAAAGAATGGAAGAAATAGAATTA
GAAGAAGACCAAACATCAATATTTGAAAAAATAAAAATGGGAATTGTGTGGTCTTTTAATGATGTGGCTGTAGCTGTATC
AAAATATGTAATTCCAGGTATGCTATTAGCGGGAATACTTTTAGTTCTTGTACCACAAGAATTCATACAACAATACTTAG
GATCACCAAATGCAGTATCTATTTTTGGAATAGCAGTAATCGGTTGCATTATGTATGTGTGTGCGGTAGGACATATACCT
TTTATTGCTGCATTGGTAGCTAGTGGAGCAGCTCCTGGTGCAGCAATAACTTTTTTAATGGCGGGAACTGCATCAAATTT
ACCTGAACTTATAAGTATTGGAAAGTTAATAGGTAAGAGGACAGTAGCCATATATACTACTACAGTAATAACTTTATCTT
TTATTGTAGGGTATTTTACAAATATTATATTACCTAACTTTGAACCTGTTATTAGTTTTGATAGAACTCAAAATACTATA
AAGGCTGCTAATAAATTTATATTTGCAGCACCAGAACCTATGAAGTATGTTTGTTCATTAATTATGTTTATACTATTTTT
AAAAGCTATGCTTCCTAAAATAAAAAAGATAAGTAAAGCAATATCAGCTTAA

Upstream 100 bases:

>100_bases
TAAAAGGAACTTTGATACTTAATGAAAAGAAAAAAATAGACAAGTTATCTAAAGAAATAATAGAAAGTGAAATAGAAAAA
GCTATTGGTGATAATAAGTA

Downstream 100 bases:

>100_bases
TAAAGGTGAAGATAAATGAGAAATATTAAAATATTTTTTGTGTTTGCAATAGTATTTTTGTTATTTGGTTGTTCTAGTAA
TATTAATGAACTCAAAGAAA

Product: putative permease

Products: NA

Alternate protein names: Permease Family Protein; Permease-Like Protein; Permease Superfamily; Permease Family; Integral Membrane Protein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MFIYYIKKIVLTSINLLNGASTWLIFSFILAGLLHNILAPDKFQKMLGNKKISSLIKATLSGMLLPICSCGVIPLGLSLY
YSGAYLGPTLAFIASTPIINPIAVFLSYGLLGPKIATIYLVVGFTVPLIIGAIGNKLGGPELKAPGVEEQIQKRMEEIEL
EEDQTSIFEKIKMGIVWSFNDVAVAVSKYVIPGMLLAGILLVLVPQEFIQQYLGSPNAVSIFGIAVIGCIMYVCAVGHIP
FIAALVASGAAPGAAITFLMAGTASNLPELISIGKLIGKRTVAIYTTTVITLSFIVGYFTNIILPNFEPVISFDRTQNTI
KAANKFIFAAPEPMKYVCSLIMFILFLKAMLPKIKKISKAISA

Sequences:

>Translated_363_residues
MFIYYIKKIVLTSINLLNGASTWLIFSFILAGLLHNILAPDKFQKMLGNKKISSLIKATLSGMLLPICSCGVIPLGLSLY
YSGAYLGPTLAFIASTPIINPIAVFLSYGLLGPKIATIYLVVGFTVPLIIGAIGNKLGGPELKAPGVEEQIQKRMEEIEL
EEDQTSIFEKIKMGIVWSFNDVAVAVSKYVIPGMLLAGILLVLVPQEFIQQYLGSPNAVSIFGIAVIGCIMYVCAVGHIP
FIAALVASGAAPGAAITFLMAGTASNLPELISIGKLIGKRTVAIYTTTVITLSFIVGYFTNIILPNFEPVISFDRTQNTI
KAANKFIFAAPEPMKYVCSLIMFILFLKAMLPKIKKISKAISA
>Mature_363_residues
MFIYYIKKIVLTSINLLNGASTWLIFSFILAGLLHNILAPDKFQKMLGNKKISSLIKATLSGMLLPICSCGVIPLGLSLY
YSGAYLGPTLAFIASTPIINPIAVFLSYGLLGPKIATIYLVVGFTVPLIIGAIGNKLGGPELKAPGVEEQIQKRMEEIEL
EEDQTSIFEKIKMGIVWSFNDVAVAVSKYVIPGMLLAGILLVLVPQEFIQQYLGSPNAVSIFGIAVIGCIMYVCAVGHIP
FIAALVASGAAPGAAITFLMAGTASNLPELISIGKLIGKRTVAIYTTTVITLSFIVGYFTNIILPNFEPVISFDRTQNTI
KAANKFIFAAPEPMKYVCSLIMFILFLKAMLPKIKKISKAISA

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789541, Length=281, Percent_Identity=23.4875444839858, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39065; Mature: 39065

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIYYIKKIVLTSINLLNGASTWLIFSFILAGLLHNILAPDKFQKMLGNKKISSLIKATL
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH
SGMLLPICSCGVIPLGLSLYYSGAYLGPTLAFIASTPIINPIAVFLSYGLLGPKIATIYL
HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
VVGFTVPLIIGAIGNKLGGPELKAPGVEEQIQKRMEEIELEEDQTSIFEKIKMGIVWSFN
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCH
DVAVAVSKYVIPGMLLAGILLVLVPQEFIQQYLGSPNAVSIFGIAVIGCIMYVCAVGHIP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FIAALVASGAAPGAAITFLMAGTASNLPELISIGKLIGKRTVAIYTTTVITLSFIVGYFT
HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
NIILPNFEPVISFDRTQNTIKAANKFIFAAPEPMKYVCSLIMFILFLKAMLPKIKKISKA
HHHCCCCHHHEECHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISA
HCC
>Mature Secondary Structure
MFIYYIKKIVLTSINLLNGASTWLIFSFILAGLLHNILAPDKFQKMLGNKKISSLIKATL
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH
SGMLLPICSCGVIPLGLSLYYSGAYLGPTLAFIASTPIINPIAVFLSYGLLGPKIATIYL
HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
VVGFTVPLIIGAIGNKLGGPELKAPGVEEQIQKRMEEIELEEDQTSIFEKIKMGIVWSFN
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCH
DVAVAVSKYVIPGMLLAGILLVLVPQEFIQQYLGSPNAVSIFGIAVIGCIMYVCAVGHIP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FIAALVASGAAPGAAITFLMAGTASNLPELISIGKLIGKRTVAIYTTTVITLSFIVGYFT
HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
NIILPNFEPVISFDRTQNTIKAANKFIFAAPEPMKYVCSLIMFILFLKAMLPKIKKISKA
HHHCCCCHHHEECHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA