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The map label for this gene is tsr [C]

Identifier: 226950640

GI number: 226950640

Start: 3661704

End: 3663710

Strand: Reverse

Name: tsr [C]

Synonym: CLM_3624

Alternate gene names: 226950640

Gene position: 3663710-3661704 (Counterclockwise)

Preceding gene: 226950641

Following gene: 226950638

Centisome position: 88.17

GC content: 27.75

Gene sequence:

>2007_bases
ATGAAAAGTATAAAGTCTAAGATAGTAACAATTATAGCTATAGTTTGTATAGTAAGTGTAGCTTTATGTTCTTCTATAAG
TTACTATTTTTCTTATAAAGCTATAATGGCAGAATCTACAAATAAAGTAAGTATGGCATCCCAAAAATATTCAGAAATGA
TAAATGGATGGCTTTTAACTAAAGCTAAATTAATGGATTCAATGGTGGTAGATTTTCAATATAATAATAAATATGATCAA
AAATATATATATAGTTATTTTCAAAGTCAATTAAAAGATAACAAAGATGTTATAGGCATGTATGTTGGATTTGAGGATAA
AAAATTCATATCCGGTAATGGATGGATACCAACTAAAGATTATGATTGCAGGCAAAGAGATTGGTATAAAGAAGCTGTTG
AAAAGAATAGAATAATATATTCGGCCCCATATATAGATAAAAAATTTAATAGTATGGTAATAACTGTAGCTAAACCAATT
AAAAAAGATGGAAAAATAATAGGCGTTGTAGGTATGGATGTAGTTGTAGATTACATTAAAACTTTAGTACAAAAAGCAAC
ACCAGTAAAAAATAGTTATGGTTTTTTATTAGATAATAATAATGATTTTATTGTTCATCCTAATAAGGAATTTCAACCTA
AAGATGAAAAAATGACTAATGTAAACAAAATTATGGATGGAAAATTAAAAGATTTAGCACAGTTGAATTCTAGCAATAAT
AAAGTTTTAAAGTCAAAAGACTATGACAATAAAGAAAAAATATTTACAAGAAGCAAGATACCATCATCAAATTGGTCAGT
AGGATTTTCAGTACCTGTTGAAGAGTTTAAAAAACCTTTAAATAATATTATTATAGGTTTTCTATCAGTCATAGCAATAT
CTTTAGTGGCAGCAGTAATTTTTGCACTATATGCAGGTAAAAAAATATCTGATCCTATTTTAAAGATAACAGATTTAGTA
AATGAAACAAAAGATTTAGATTTAACTAGCAGGAACAACTATGAAACTATAGCTTTATATAAAGATGAAACAGGAATAAT
AGGTAGGGCAGTTATAGATTTAAGAGAAGAATTAAAAAATATTGTAGAAGAACTAAAAAAATCATCAAAGGATGTATTAA
AATATTCAGAAATAGTAAATGGAGCTACGGATGAAACAGTTCAATCTATAGAGGCTATATCAACAACAGTAGATGAGCTA
GCAAAAGGATCTGTAGATCAGGCTAAAGATGCACAAAATGGATCAGAAAAATTGTTTAGTTTAGCAGAGGAGATTAAAAT
AACACATAATAGCACAAATTTAGTTAAAACATATTCCTCAGAAACTAAAGAAAATAGTGAAAAAGGTATATTATCTATGA
AAGAAACTATAGATAAATTTAAAGAGAATAATAAGGTGAATAAAGAATTAGGTAGAAATGTAGAGATGTTATCTAGTAAG
TCAGGATCTATAGGAGAAATAATAAATTCCATACAGTCTATTGCAGAACAAACAAATTTATTAGCTTTAAATGCGGCTAT
AGAAGCGGCTAGAGCAGGGGAAGCAGGGAAAGGCTTTGCTGTTGTGGCTGAAGAAATAAGAAAATTAGCAGAACAAACAT
CTATTTCAACTAAAGAAATAGAAAATATAGTAAGGGAAATACAGTTTGAAATAGATAATACAAAAAATAATATGGATTTA
TCAGAGAAGGTTGTGGGAGAAGTAAATGATGCTATGAAAATATCAAAGAAATCCTTTGATATCATAACAAAATCTATAGT
AGATATAATAAATCAAATAGAAATTTTAGTAGAAAATGTTAACAAGGTAGATTCAGATAAGGAAGAGGTATTAACTGCAA
TACAAGGAATATCTGCTATAGCTGAAGAGTCAGCGGCTTCTACAGAAGAAGTATCAGCTTCCGTTGAAGAACAAACAGCG
TCTATGGAAAGTATTTCACAAACAGCTAAAGATTTAAAAGAAATAACAAGTACATTGGATGAATTAGTTAACAAATTCGA
AATTTAG

Upstream 100 bases:

>100_bases
AAATAAAGATAAAAATGTAATTTATGTATTAATTTTTGCAGAATTTAAACGATAACATAAATATTATTATTATTTTAACA
AAGTTGGGAGAGAAATATAT

Downstream 100 bases:

>100_bases
AAATAGAAGTAATTCAAATTTTAATAAAAAGGCCTTTTTTTAATCGGATTTTACATGAATTAGATTTATTAAAGAAAGAC
CTTTTTATCTAATTTTTACT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVEKNRIIYSAPYIDKKFNSMVITVAKPI
KKDGKIIGVVGMDVVVDYIKTLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLNSSNN
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVIFALYAGKKISDPILKITDLV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSSETKENSEKGILSMKETIDKFKENNKVNKELGRNVEMLSSK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENVNKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFEI

Sequences:

>Translated_668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVEKNRIIYSAPYIDKKFNSMVITVAKPI
KKDGKIIGVVGMDVVVDYIKTLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLNSSNN
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVIFALYAGKKISDPILKITDLV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSSETKENSEKGILSMKETIDKFKENNKVNKELGRNVEMLSSK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENVNKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFEI
>Mature_668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVEKNRIIYSAPYIDKKFNSMVITVAKPI
KKDGKIIGVVGMDVVVDYIKTLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLNSSNN
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVIFALYAGKKISDPILKITDLV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSSETKENSEKGILSMKETIDKFKENNKVNKELGRNVEMLSSK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENVNKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFEI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=272, Percent_Identity=31.25, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1787690, Length=312, Percent_Identity=27.2435897435897, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788194, Length=391, Percent_Identity=24.5524296675192, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788195, Length=204, Percent_Identity=30.8823529411765, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789453, Length=266, Percent_Identity=25.5639097744361, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74591; Mature: 74591

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KAKLMDSMVVDFQYNNKYDQKYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKD
HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCC
YDCRQRDWYKEAVEKNRIIYSAPYIDKKFNSMVITVAKPIKKDGKIIGVVGMDVVVDYIK
CCCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHH
TLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLNSSNN
HHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCC
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVI
CEEECCCCCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALYAGKKISDPILKITDLVNETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKN
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDELAKGSVDQAKDAQNGSEKLFS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LAEEIKITHNSTNLVKTYSSETKENSEKGILSMKETIDKFKENNKVNKELGRNVEMLSSK
HHHHHEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCC
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEI
CCCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENIVREIQFEIDNTKNNMDLSEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTASMESISQTAKDLKEITSTLD
HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNKFEI
HHHHHHCC
>Mature Secondary Structure
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KAKLMDSMVVDFQYNNKYDQKYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKD
HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCC
YDCRQRDWYKEAVEKNRIIYSAPYIDKKFNSMVITVAKPIKKDGKIIGVVGMDVVVDYIK
CCCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHH
TLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLNSSNN
HHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCC
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVI
CEEECCCCCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALYAGKKISDPILKITDLVNETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKN
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDELAKGSVDQAKDAQNGSEKLFS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LAEEIKITHNSTNLVKTYSSETKENSEKGILSMKETIDKFKENNKVNKELGRNVEMLSSK
HHHHHEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCC
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEI
CCCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENIVREIQFEIDNTKNNMDLSEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTASMESISQTAKDLKEITSTLD
HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNKFEI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA