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The map label for this gene is 226950140

Identifier: 226950140

GI number: 226950140

Start: 3092735

End: 3094438

Strand: Reverse

Name: 226950140

Synonym: CLM_3094

Alternate gene names: NA

Gene position: 3094438-3092735 (Counterclockwise)

Preceding gene: 226950141

Following gene: 226950139

Centisome position: 74.47

GC content: 21.83

Gene sequence:

>1704_bases
ATGAGTACTATTACGGAGTGTATTACAGAAAAAAGTAAAGATAATAAAAATATATTTAGAATAAAAAAAGATAATAAATG
GATATATATAGGGAGTAAGTACTCTGTTTCTAGAGATGTAGATAATTTTATAAATAAAACCTTGAAAATAATAAATGATG
AACAGTTATTAGTTATTTTTGGTTTAGGAGCGGGAGAACATATAATAAAATTATTGTCTTATTTATCACAACAAAATAAA
GTAATTATAATAGAACCTAATAATTCTGTTATAAACTCTTTTAGACAATTAGGATACTATAAAGAAATTATATTGGACAA
AAGAATAGAAATAGCTAGATATGATAGTATAATTTTAGAAAATATTATTAGTAAATATATTAACAATATGATTAACATGG
AATTTTTAATATATGCTAATTATGACAAAATATACAACAAAGAGATTTTAAAAACTATAGAAATTTTAAAAAAATATAAA
AAAGATAAATCCTTAGAAAATAATACATTAATAAATTGTGGTAAAAATAATTGGATTAATTATGTTAATAATCTTAATAG
TATAATAAACAGTATCCCTATAAATAATATAAAAGATTTATATAAAGGGAAATCAGCTATAATAGTGTCTGCAGGACCAT
CTCTAGATAAGAATATATATTTATTAAAAGAATATAGGGAGAATTTTATAATAATATGTGGCTTAAGAACACTAAAACCA
TTATTGGATATAGGCGTAAAACCAGATTTTATTTGTGTAATAGATTTTGGTGATAAAATATATGAGTTAGGACATCCTTT
TTTAAATTTTAATATTCCATTAGTTTATCACATAGCTTCTAATTATAATTTTATAAGGGAATATAAAGGTCCTAAAATAT
TTTTTAATACCTATAACATAGAAAAAAATTATTTAGATAATTTAATAAACAAAAAAGTAGATTCAATAATACAAGGTGGC
TCAGTAGCTCATGTATGTATGGGACTAGCTATTTACTTAGGATGTAATAATATAATTTTTATAGGACAAGATCTAGCTTA
TACAGGAGAAAGGCTTCACTCAAATAGTTCTACTCTTGAAACTGAAGGTGGAAATATAGGTATGTATGATGATAATATAT
ATGTAGATGGTATAAATGGAAATAAGGTTAGGACAAGCTGTGAATTGGATGCTTATAGAAGATATATAGAATTTTATATT
CATATGCTTAAAAATATTAACTTTATAAATAGTACTGAAGGTGGGGCAAACATAAAGGGTACAAAAGTAATGCCTTTAAA
AGAATCCTTAAATAAATATGGTAAATTTGTCAGTAAAAAAAATATTGAACAATTATGTGAAAAATTTTATATAGATAAAA
ACTATGCAATATTAAAAATTAATAACATTAAAGATTATATAGAAGAAGATATAAAAAATGCTGAAGAGTATTTTAAAAAT
TTATCTAAAAATAGTATCGATTCTAAAAGTATAAAAATTTATATAGAAGCTATTTTAAGCCATAAATATTGGGATTTTAT
TTATTGGATAATATACCCTGTAATATTAAAATCAAATAATAAACAATTTTATACTAAGTTTTCTATGAATAAGGACGAAA
AAATAAATGTGATAAAAAATAAATATCATTTTCTTTTAAGTAGTATAGAAAATGAATTAGAAGGAGCATTAAATATATTA
AATAAGCTTGAGGTGGAGGATTAA

Upstream 100 bases:

>100_bases
AGCGGCAGAACAATATCCATATTTAGCGGATTTATTGGGAAATTATAGCAGAAAATTATTAAAAGAAGTTTTGTAAATTT
TAAAATAGTTGTGGAAAGGA

Downstream 100 bases:

>100_bases
AAGATGAATGAAAAAATAGAAGCGTTAAGAACTGCAAGTGAATATATATTAAATTTAAAAAATGGAATAAAAACAGCATC
CGAAAATTTTCAAAATGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; PseD Protein

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLSQQNK
VIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYK
KDKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP
LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSIIQGG
SVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYI
HMLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN
LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGALNIL
NKLEVED

Sequences:

>Translated_567_residues
MSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLSQQNK
VIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYK
KDKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP
LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSIIQGG
SVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYI
HMLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN
LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGALNIL
NKLEVED
>Mature_566_residues
STITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLSQQNKV
IIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKK
DKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKPL
LDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSIIQGGS
VAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIH
MLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKNL
SKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGALNILN
KLEVED

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65933; Mature: 65802

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIF
CCHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE
GLGAGEHIIKLLSYLSQQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILE
ECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKKDKSLENNTLINCGKNNWIN
HHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHH
YVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP
HHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECHHHHHH
LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNI
HHHCCCCCCEEEEECCCCHHHHHCCCEEECCCCEEEEEECCCCCHHHCCCCEEEEEEECC
EKNYLDNLINKKVDSIIQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLE
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHCCCCCEEE
TEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIHMLKNINFINSTEGGANIKG
ECCCEEEEECCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
TKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN
CEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKN
CCCCCCCCCHHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
KYHFLLSSIENELEGALNILNKLEVED
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIF
CHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE
GLGAGEHIIKLLSYLSQQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILE
ECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKKDKSLENNTLINCGKNNWIN
HHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHH
YVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP
HHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECHHHHHH
LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNI
HHHCCCCCCEEEEECCCCHHHHHCCCEEECCCCEEEEEECCCCCHHHCCCCEEEEEEECC
EKNYLDNLINKKVDSIIQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLE
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHCCCCCEEE
TEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIHMLKNINFINSTEGGANIKG
ECCCEEEEECCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
TKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN
CEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKN
CCCCCCCCCHHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
KYHFLLSSIENELEGALNILNKLEVED
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA