Click here to switch to the map view.

The map label for this gene is 226950109

Identifier: 226950109

GI number: 226950109

Start: 3057694

End: 3059163

Strand: Reverse

Name: 226950109

Synonym: CLM_3062

Alternate gene names: NA

Gene position: 3059163-3057694 (Counterclockwise)

Preceding gene: 226950110

Following gene: 226950108

Centisome position: 73.62

GC content: 21.22

Gene sequence:

>1470_bases
ATGGAGAATTTTTATATAAAGTTAAATGAAATAAAATCTAAAATTAAAGGTTTTATAGAAAAAAATCAATTAGATTATGC
CCATAGACTAATAGATAATTATATATCACAAATATCTGATGATATAGAAATTTATTCAATGAAAGCGGTAGTGTTAATAT
TAGAGGGAAATCTGGTTGATGCAGAAAAAGTTTTAAAATTAGGATTATCCATAAATAAGAATAATTTTGATTTAAACTAT
AATTTAGCTTATATATGTGAAATCCAACAAAGATATTATGAAGCATTATTGTTTTATATTGTTGCTAAAGAAAATAATAA
TAATTATGATATGATTAATGAAATAGAAAATAGAATAAGTTCTATTAAAGAATTACTAGGTATAAATAATAAAAATTATG
ACTTTATTTTGTGTGGATCTAATATAAATAAAAATATTTTACAAAATTTAAAGAAAATGGGTAATATTAAAGGTTTTATA
GAAACTAATGATTTAGAAGTAGAAAAGGAACTAGTTTCAATAATAAAGTGGAATGAAATAAAGAATTTAAATTATGATTA
CATGATTATTATGGAGAACGATATAGAAAGAAATAAAAAGATTACAAAAAGGTTAAAAAAATACAATGTAAATTTCAATA
AAGTATATAACTATTGTGATTATAATTTACCTATAGAAGGATTTGAATATAAACTTTATGATTTTTTTCTAAAAGATAAA
GTAGAACTTTTAGTAACAGGTTTATCTTATGCAGAAACAGGAATTGATTGCAAATATTTAGATGTTTCTGCATGTAATTT
TGCATTATCTAGTCAAGATTTATTTTATGATTACAATATCCTTAAATACTTACTTCAATTTAAAGATAAAATGTCTAATC
TAAAATATGTAATAATAGGATTGTCCTATTACAGTTTTGACTATGATTTGTGGAAGTCAAGTGAAGCAATAAGAATTCAT
AGATATTCAGAATTTATAAAAGATATACATAATTATACTTCAAAATTAAGCATAGATATTAATAAGTCTCTATATAGAAC
TATGCATTCTAAAGAAGATTATAATAAAATGATGCTAGTCCAAATGAATACAGTTATGTATAATGAAAATGCAGAAATCC
AAGAATATATAGCTAAGCATCATGCTGCAATGTGCCATCCAGAAACAGTTAAAGAAAATAAAATTATATTTAAAAATTAT
TTGGAGTTATTAAAATCAATAAACATTAAACCTATAATTGTAGTTTTTCCAACTAGTAATTATCACTATAAGTTCTTTGA
GGATGGTGTTTTAAAGAAAAGGTTTTATAATATATTAGAAGAATTTTCAAAAGAATATAGTTTGAAAGTTCTTGATTATT
TTAAGTCAGATTTGTTTGATTATAATGATTTTTGGGATTACTCTCATTTAAATAAAAATGGATCAAAAAAAATGACTGAA
ATTTTAAATAATATTATTCTCAATAAATAA

Upstream 100 bases:

>100_bases
TTATGATTATGTTAAATGAAATTTATTAATACATAAATGTAAGTTGGATTATAAAATAGAAGATAATTTATTAAAGTCAA
AATAAAAGGGGCAATGTAAG

Downstream 100 bases:

>100_bases
AAATAAAAAATAGAACTTATATGATTTATTGTGTAATCATAAGAAAATTTTTAATGGAAAACTGAAAGTTAAATAGGAGC
ATTATATGAAAAAATTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MENFYIKLNEIKSKIKGFIEKNQLDYAHRLIDNYISQISDDIEIYSMKAVVLILEGNLVDAEKVLKLGLSINKNNFDLNY
NLAYICEIQQRYYEALLFYIVAKENNNNYDMINEIENRISSIKELLGINNKNYDFILCGSNINKNILQNLKKMGNIKGFI
ETNDLEVEKELVSIIKWNEIKNLNYDYMIIMENDIERNKKITKRLKKYNVNFNKVYNYCDYNLPIEGFEYKLYDFFLKDK
VELLVTGLSYAETGIDCKYLDVSACNFALSSQDLFYDYNILKYLLQFKDKMSNLKYVIIGLSYYSFDYDLWKSSEAIRIH
RYSEFIKDIHNYTSKLSIDINKSLYRTMHSKEDYNKMMLVQMNTVMYNENAEIQEYIAKHHAAMCHPETVKENKIIFKNY
LELLKSINIKPIIVVFPTSNYHYKFFEDGVLKKRFYNILEEFSKEYSLKVLDYFKSDLFDYNDFWDYSHLNKNGSKKMTE
ILNNIILNK

Sequences:

>Translated_489_residues
MENFYIKLNEIKSKIKGFIEKNQLDYAHRLIDNYISQISDDIEIYSMKAVVLILEGNLVDAEKVLKLGLSINKNNFDLNY
NLAYICEIQQRYYEALLFYIVAKENNNNYDMINEIENRISSIKELLGINNKNYDFILCGSNINKNILQNLKKMGNIKGFI
ETNDLEVEKELVSIIKWNEIKNLNYDYMIIMENDIERNKKITKRLKKYNVNFNKVYNYCDYNLPIEGFEYKLYDFFLKDK
VELLVTGLSYAETGIDCKYLDVSACNFALSSQDLFYDYNILKYLLQFKDKMSNLKYVIIGLSYYSFDYDLWKSSEAIRIH
RYSEFIKDIHNYTSKLSIDINKSLYRTMHSKEDYNKMMLVQMNTVMYNENAEIQEYIAKHHAAMCHPETVKENKIIFKNY
LELLKSINIKPIIVVFPTSNYHYKFFEDGVLKKRFYNILEEFSKEYSLKVLDYFKSDLFDYNDFWDYSHLNKNGSKKMTE
ILNNIILNK
>Mature_489_residues
MENFYIKLNEIKSKIKGFIEKNQLDYAHRLIDNYISQISDDIEIYSMKAVVLILEGNLVDAEKVLKLGLSINKNNFDLNY
NLAYICEIQQRYYEALLFYIVAKENNNNYDMINEIENRISSIKELLGINNKNYDFILCGSNINKNILQNLKKMGNIKGFI
ETNDLEVEKELVSIIKWNEIKNLNYDYMIIMENDIERNKKITKRLKKYNVNFNKVYNYCDYNLPIEGFEYKLYDFFLKDK
VELLVTGLSYAETGIDCKYLDVSACNFALSSQDLFYDYNILKYLLQFKDKMSNLKYVIIGLSYYSFDYDLWKSSEAIRIH
RYSEFIKDIHNYTSKLSIDINKSLYRTMHSKEDYNKMMLVQMNTVMYNENAEIQEYIAKHHAAMCHPETVKENKIIFKNY
LELLKSINIKPIIVVFPTSNYHYKFFEDGVLKKRFYNILEEFSKEYSLKVLDYFKSDLFDYNDFWDYSHLNKNGSKKMTE
ILNNIILNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58380; Mature: 58380

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFYIKLNEIKSKIKGFIEKNQLDYAHRLIDNYISQISDDIEIYSMKAVVLILEGNLVD
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCC
AEKVLKLGLSINKNNFDLNYNLAYICEIQQRYYEALLFYIVAKENNNNYDMINEIENRIS
HHHHHHHCCEECCCCEEEECCEEEEEHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHH
SIKELLGINNKNYDFILCGSNINKNILQNLKKMGNIKGFIETNDLEVEKELVSIIKWNEI
HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC
KNLNYDYMIIMENDIERNKKITKRLKKYNVNFNKVYNYCDYNLPIEGFEYKLYDFFLKDK
CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEHHHHHHHHCC
VELLVTGLSYAETGIDCKYLDVSACNFALSSQDLFYDYNILKYLLQFKDKMSNLKYVIIG
HHHHEECCHHHHCCCCEEEEEEHHHCEEECCCCCEEHHHHHHHHHHHHHHHCCCEEEEEE
LSYYSFDYDLWKSSEAIRIHRYSEFIKDIHNYTSKLSIDINKSLYRTMHSKEDYNKMMLV
EEEEEECHHHHCCCCCEEEHHHHHHHHHHHHHHHEEEEEECHHHHHHHHCCCCCCCEEEE
QMNTVMYNENAEIQEYIAKHHAAMCHPETVKENKIIFKNYLELLKSINIKPIIVVFPTSN
EEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCC
YHYKFFEDGVLKKRFYNILEEFSKEYSLKVLDYFKSDLFDYNDFWDYSHLNKNGSKKMTE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHH
ILNNIILNK
HHHHHHCCC
>Mature Secondary Structure
MENFYIKLNEIKSKIKGFIEKNQLDYAHRLIDNYISQISDDIEIYSMKAVVLILEGNLVD
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCC
AEKVLKLGLSINKNNFDLNYNLAYICEIQQRYYEALLFYIVAKENNNNYDMINEIENRIS
HHHHHHHCCEECCCCEEEECCEEEEEHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHH
SIKELLGINNKNYDFILCGSNINKNILQNLKKMGNIKGFIETNDLEVEKELVSIIKWNEI
HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC
KNLNYDYMIIMENDIERNKKITKRLKKYNVNFNKVYNYCDYNLPIEGFEYKLYDFFLKDK
CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEHHHHHHHHCC
VELLVTGLSYAETGIDCKYLDVSACNFALSSQDLFYDYNILKYLLQFKDKMSNLKYVIIG
HHHHEECCHHHHCCCCEEEEEEHHHCEEECCCCCEEHHHHHHHHHHHHHHHCCCEEEEEE
LSYYSFDYDLWKSSEAIRIHRYSEFIKDIHNYTSKLSIDINKSLYRTMHSKEDYNKMMLV
EEEEEECHHHHCCCCCEEEHHHHHHHHHHHHHHHEEEEEECHHHHHHHHCCCCCCCEEEE
QMNTVMYNENAEIQEYIAKHHAAMCHPETVKENKIIFKNYLELLKSINIKPIIVVFPTSN
EEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCC
YHYKFFEDGVLKKRFYNILEEFSKEYSLKVLDYFKSDLFDYNDFWDYSHLNKNGSKKMTE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHH
ILNNIILNK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA