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The map label for this gene is 226950094

Identifier: 226950094

GI number: 226950094

Start: 3046438

End: 3047391

Strand: Reverse

Name: 226950094

Synonym: CLM_3047

Alternate gene names: NA

Gene position: 3047391-3046438 (Counterclockwise)

Preceding gene: 226950095

Following gene: 226950093

Centisome position: 73.34

GC content: 23.38

Gene sequence:

>954_bases
ATGAATTTTTATGTATGTGCCACGCCTTATCATTTATTTATTACATTATGTGATATAGCTAATAGTAATATAAAAAGCTA
TATATATTTATCTACACATGATGATAATATTTTTAAATCATTTTTAAAATATAAAGAAAAACTTATTGCTCTTAAGAATA
TAGAAAAGGTTTGGGTGAGAAAACGAAGTAATATTCATGAGAGACTATTTATAGAAAGCATTAAGGATAAATTAGAATAT
AAAGGTTTAAAAAAAGAAATAATCAATTCTAATGTTATTATATTTCCATGGAATCCATACTCTTTATTTTCACCATCAGA
ATATATATTTAAGTATGCTAAAAAAGTGAAGTTAATAGAAGAAGGGGCTAATCTCTATATAATGAAGAAACCTTCTAAAG
CATTTATGTTAGTAAAAAGATATATATACAGAAGAAATTTAAATTTTTACAAAGATGAAAAAATTACAGAAGTTATGGTC
CAATTTCCAGAAAAATATCCAAAGCATTTAAAGGATAAATTAGCATACTTAGACTTAAATGGTATGGTTACTAAAATAGA
TGCTATTAGTAAAAATAATATAGTTAATATTTTTTTAGATAAATTAAATAGGTATGATTTTAAAAATAAAAGTTTATTAA
TCTTATCTCAGCCATTATCAGAGGATGGCTATATAACGGAAGAAAAAAAGATAAAACTTTATAAGGATATAATAAATGAA
TATGGACAGGGCTATAATATTGTATTTAAAAAACATCCTAGAGAGAAAACCATATATAATTTTCCTAATGTATTAGAATT
AGATGGGAATTTCCCTAGTGAACTATTTAAATTGCTAGATATAAAGTTTGAAAAAGCCATAGGTGTTTGTACTGGTTCAG
TTAAATTTGTGGATGCGAAAGAAACTTTTAATATAGATGAGAATTTTTTAAAGAAATGTAAAGTGAAAAAATAA

Upstream 100 bases:

>100_bases
ATGTAATAAATATGGAAAATATTAATTGGCCATCAAAAATACGAGGTTTTATTAAAAGAAAATTTAGAAATTAGAAATTA
TATAAAGGATATGATGATAA

Downstream 100 bases:

>100_bases
TGATATGTCTATTTGGTAACATTAGGAGGAAAAATGAACAAGTTAAAAAATTTAGACTTTAATATGTTAGTTTTATACGT
ATTATTAACATTTTTTGTTA

Product: lipooligosaccharide sialyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKSFLKYKEKLIALKNIEKVWVRKRSNIHERLFIESIKDKLEY
KGLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIEEGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMV
QFPEKYPKHLKDKLAYLDLNGMVTKIDAISKNNIVNIFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKDIINE
YGQGYNIVFKKHPREKTIYNFPNVLELDGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAKETFNIDENFLKKCKVKK

Sequences:

>Translated_317_residues
MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKSFLKYKEKLIALKNIEKVWVRKRSNIHERLFIESIKDKLEY
KGLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIEEGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMV
QFPEKYPKHLKDKLAYLDLNGMVTKIDAISKNNIVNIFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKDIINE
YGQGYNIVFKKHPREKTIYNFPNVLELDGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAKETFNIDENFLKKCKVKK
>Mature_317_residues
MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKSFLKYKEKLIALKNIEKVWVRKRSNIHERLFIESIKDKLEY
KGLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIEEGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMV
QFPEKYPKHLKDKLAYLDLNGMVTKIDAISKNNIVNIFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKDIINE
YGQGYNIVFKKHPREKTIYNFPNVLELDGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAKETFNIDENFLKKCKVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012477 [H]

Pfam domain/function: PF07922 Glyco_transf_52 [H]

EC number: NA

Molecular weight: Translated: 37623; Mature: 37623

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKSFLKYKEKLIALKNIEKVWVR
CCEEEEECHHHEEHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KRSNIHERLFIESIKDKLEYKGLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIE
HHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
EGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMVQFPEKYPKHLKDKLAYLDLN
CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
GMVTKIDAISKNNIVNIFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKDIINE
CCEEEEECCCCCCEEEHEEHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
YGQGYNIVFKKHPREKTIYNFPNVLELDGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAK
HCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECCEEEEECH
ETFNIDENFLKKCKVKK
HCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKSFLKYKEKLIALKNIEKVWVR
CCEEEEECHHHEEHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KRSNIHERLFIESIKDKLEYKGLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIE
HHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
EGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMVQFPEKYPKHLKDKLAYLDLN
CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
GMVTKIDAISKNNIVNIFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKDIINE
CCEEEEECCCCCCEEEHEEHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
YGQGYNIVFKKHPREKTIYNFPNVLELDGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAK
HCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECCEEEEECH
ETFNIDENFLKKCKVKK
HCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]