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The map label for this gene is flgC [H]

Identifier: 226950077

GI number: 226950077

Start: 3028924

End: 3029358

Strand: Reverse

Name: flgC [H]

Synonym: CLM_3030

Alternate gene names: 226950077

Gene position: 3029358-3028924 (Counterclockwise)

Preceding gene: 226950078

Following gene: 226950076

Centisome position: 72.9

GC content: 33.79

Gene sequence:

>435_bases
ATGATTAAAGCATTTGATACTATGAGAATTAGTGCTAGTGGGTTATCCGCTGAAAGATTGAGAATGGATACTATAGCTTC
TAATATTTCTAATGCCACTACTACAAGGACGGAAAATGGTGGTCCTTATAAGAGAAAAATAGCTGTTTTTGAAGAAAATC
TTAATAATGAATTGAATAAAAAAAATGGAGCAACTGAAAAAAAGCTTTATGGAGTTAAAGCTACAGGTATAGTGGAAGAT
TCTTCTCCTGTAAGAAAAATGTATGATCCATCTCATCCAGATGCGGATGAGGAGGGGTATGTATCTATGCCTAACGTAAA
TGTATTAAATGAAATGGCAGATATGATGGCTTCAGTACGTACCTATGAAGCAAATGTAACAGTTATGAATGCAGAAAAAT
CAATGTTTGGAAAAGCGTTGGAAATTGGTAAATAG

Upstream 100 bases:

>100_bases
TAGCCTAAAGGAATTTTAAATTTTATTAGATATTGCTCTAGATCAAGCTTAAAAAATTTGTCTAGGAATTTATATATGGA
ATGAAAAAGGGGGAAATAAT

Downstream 100 bases:

>100_bases
GAGAGTTGATTATGAGAGTGAATGAATTTGTACCCAATATTAAGGTTTTTGATAACTTTGAAAAAAACTTTATAAATAAA
AATGAAAAGACAGAAAATAC

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNKKNGATEKKLYGVKATGIVED
SSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKALEIGK

Sequences:

>Translated_144_residues
MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNKKNGATEKKLYGVKATGIVED
SSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKALEIGK
>Mature_144_residues
MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNKKNGATEKKLYGVKATGIVED
SSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKALEIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=144, Percent_Identity=38.1944444444444, Blast_Score=102, Evalue=7e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15862; Mature: 15862

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNK
CCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHC
KNGATEKKLYGVKATGIVEDSSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVR
CCCCCCHHEECCEECEEECCCCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
TYEANVTVMNAEKSMFGKALEIGK
HCCCCEEEEECCHHHHHHHHCCCC
>Mature Secondary Structure
MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNK
CCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHC
KNGATEKKLYGVKATGIVEDSSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVR
CCCCCCHHEECCEECEEECCCCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
TYEANVTVMNAEKSMFGKALEIGK
HCCCCEEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]