Click here to switch to the map view.

The map label for this gene is 226949999

Identifier: 226949999

GI number: 226949999

Start: 2957795

End: 2958931

Strand: Reverse

Name: 226949999

Synonym: CLM_2952

Alternate gene names: NA

Gene position: 2958931-2957795 (Counterclockwise)

Preceding gene: 226950000

Following gene: 226949998

Centisome position: 71.21

GC content: 25.95

Gene sequence:

>1137_bases
GTGAATGTAAAAAATAAGGATTTTAAAGATTTAACAGAAGAATGGACAGGAAAAGTAACTAAAACAAATATGTATAAAAA
TAAAGAATTAACCCAAAATGGAAAAGGAATTGATTATACACAATTTATACAGCTAAGATTTCATTCCATAAATGAAAAAC
ATATAGCAGACATTTATGGAATTGAAGGGTGGTATTTATTATGGAATTTAATGTGTCAAGCTAAAAGTAATAAAACAATG
TTTTTGGAAACAACAATAAATACAATTTATCTAAAAATAAATAAGAAAATAACAACAGATAATATAAAAAAATATTTATT
TAAATTTAATCAAGAAGGAATTTTAAAATTAAATAAAGTTAAAGGAATGAACGTAAACACACCAATCCAAATATTTATTG
CTTATAACAATAATGAGTATTATCCTTTTCAAAATGATAAGTGGACAGGTTATAGAGCTTTACCTATCGGTTTCATAGAA
ACTGTACTAAATAATGTTTCATCAGAAGAATGGGCAGTATTTACAACGTTATGTGTTAGATATAGGTACTGGCAGACTAA
ACCTAGTCAAGACTCGATGGGAAACATATACTATAAGTTATTTTTGGAACATTATTCTTTTCCAAGCATGGAGCAAATAG
GAGAAATTATAGGAAGAAAAAAATCACAAGTTGGAAAGTACATAGATAAACTGGCAAAGAACAATTTGGGTATTATCAAA
GTATATACTTCGGATAAAACAGAAATGACATCATTGTATGATAAGGAAGGAAAATTTATTGGAAATAAAAGAAAGAACTA
CATATATTACATATCACTTTTTGAGAGAGTGGAATACATATATCAGCATATAATTAAAATTGATAAAAGAGATAAAAAAC
AAAGAATCAACAACTCAGCACATTTCGATGATATAGCAGCAAGTCATAAATACGTTTACTTAACAGATGCAGATTACTTC
AATCATTATTTTCAAAATTATTTAAACGAATATAAGAAAGTTTTAGATACTAAAGACTTTGACTTATATAAACAGATTGA
AAAGAAGTGTGAACATGAAAATGGAATAACAAATATACCTTTAACAGCAAAAGAAACAATAGAAGATGAGAATGTAGTAA
AAGTAAATTTTGGGTAA

Upstream 100 bases:

>100_bases
AATTACAACTGAGGATATGAAAACTATCATTTTAAAAGAAGAAACGAATTTCTAAAAACAGTACTAAAAAAATCTAAAAT
ATCAAAAGGAAGGTGTTTAT

Downstream 100 bases:

>100_bases
AAACTAGCTTGAAATCTCTGTAACCGTTGATATGACTGACTTGTATTTTGTATGATTTTGAGCCAAAAATTCCTTAAAAT
AATACCTGTTTGTATGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNVKNKDFKDLTEEWTGKVTKTNMYKNKELTQNGKGIDYTQFIQLRFHSINEKHIADIYGIEGWYLLWNLMCQAKSNKTM
FLETTINTIYLKINKKITTDNIKKYLFKFNQEGILKLNKVKGMNVNTPIQIFIAYNNNEYYPFQNDKWTGYRALPIGFIE
TVLNNVSSEEWAVFTTLCVRYRYWQTKPSQDSMGNIYYKLFLEHYSFPSMEQIGEIIGRKKSQVGKYIDKLAKNNLGIIK
VYTSDKTEMTSLYDKEGKFIGNKRKNYIYYISLFERVEYIYQHIIKIDKRDKKQRINNSAHFDDIAASHKYVYLTDADYF
NHYFQNYLNEYKKVLDTKDFDLYKQIEKKCEHENGITNIPLTAKETIEDENVVKVNFG

Sequences:

>Translated_378_residues
MNVKNKDFKDLTEEWTGKVTKTNMYKNKELTQNGKGIDYTQFIQLRFHSINEKHIADIYGIEGWYLLWNLMCQAKSNKTM
FLETTINTIYLKINKKITTDNIKKYLFKFNQEGILKLNKVKGMNVNTPIQIFIAYNNNEYYPFQNDKWTGYRALPIGFIE
TVLNNVSSEEWAVFTTLCVRYRYWQTKPSQDSMGNIYYKLFLEHYSFPSMEQIGEIIGRKKSQVGKYIDKLAKNNLGIIK
VYTSDKTEMTSLYDKEGKFIGNKRKNYIYYISLFERVEYIYQHIIKIDKRDKKQRINNSAHFDDIAASHKYVYLTDADYF
NHYFQNYLNEYKKVLDTKDFDLYKQIEKKCEHENGITNIPLTAKETIEDENVVKVNFG
>Mature_378_residues
MNVKNKDFKDLTEEWTGKVTKTNMYKNKELTQNGKGIDYTQFIQLRFHSINEKHIADIYGIEGWYLLWNLMCQAKSNKTM
FLETTINTIYLKINKKITTDNIKKYLFKFNQEGILKLNKVKGMNVNTPIQIFIAYNNNEYYPFQNDKWTGYRALPIGFIE
TVLNNVSSEEWAVFTTLCVRYRYWQTKPSQDSMGNIYYKLFLEHYSFPSMEQIGEIIGRKKSQVGKYIDKLAKNNLGIIK
VYTSDKTEMTSLYDKEGKFIGNKRKNYIYYISLFERVEYIYQHIIKIDKRDKKQRINNSAHFDDIAASHKYVYLTDADYF
NHYFQNYLNEYKKVLDTKDFDLYKQIEKKCEHENGITNIPLTAKETIEDENVVKVNFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45000; Mature: 45000

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKNKDFKDLTEEWTGKVTKTNMYKNKELTQNGKGIDYTQFIQLRFHSINEKHIADIYG
CCCCCCCHHHHHHHHCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHC
IEGWYLLWNLMCQAKSNKTMFLETTINTIYLKINKKITTDNIKKYLFKFNQEGILKLNKV
CCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECEECHHHHHHHHHHCCCCCCEEEEEE
KGMNVNTPIQIFIAYNNNEYYPFQNDKWTGYRALPIGFIETVLNNVSSEEWAVFTTLCVR
CCCCCCCCEEEEEEECCCEECCCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHH
YRYWQTKPSQDSMGNIYYKLFLEHYSFPSMEQIGEIIGRKKSQVGKYIDKLAKNNLGIIK
HHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE
VYTSDKTEMTSLYDKEGKFIGNKRKNYIYYISLFERVEYIYQHIIKIDKRDKKQRINNSA
EEECCCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
HFDDIAASHKYVYLTDADYFNHYFQNYLNEYKKVLDTKDFDLYKQIEKKCEHENGITNIP
CCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
LTAKETIEDENVVKVNFG
CCHHHHCCCCCEEEEECC
>Mature Secondary Structure
MNVKNKDFKDLTEEWTGKVTKTNMYKNKELTQNGKGIDYTQFIQLRFHSINEKHIADIYG
CCCCCCCHHHHHHHHCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHC
IEGWYLLWNLMCQAKSNKTMFLETTINTIYLKINKKITTDNIKKYLFKFNQEGILKLNKV
CCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECEECHHHHHHHHHHCCCCCCEEEEEE
KGMNVNTPIQIFIAYNNNEYYPFQNDKWTGYRALPIGFIETVLNNVSSEEWAVFTTLCVR
CCCCCCCCEEEEEEECCCEECCCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHH
YRYWQTKPSQDSMGNIYYKLFLEHYSFPSMEQIGEIIGRKKSQVGKYIDKLAKNNLGIIK
HHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE
VYTSDKTEMTSLYDKEGKFIGNKRKNYIYYISLFERVEYIYQHIIKIDKRDKKQRINNSA
EEECCCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
HFDDIAASHKYVYLTDADYFNHYFQNYLNEYKKVLDTKDFDLYKQIEKKCEHENGITNIP
CCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
LTAKETIEDENVVKVNFG
CCHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA