Click here to switch to the map view.

The map label for this gene is 226949972

Identifier: 226949972

GI number: 226949972

Start: 2938608

End: 2939000

Strand: Reverse

Name: 226949972

Synonym: CLM_2925

Alternate gene names: NA

Gene position: 2939000-2938608 (Counterclockwise)

Preceding gene: 226949973

Following gene: 226949971

Centisome position: 70.73

GC content: 24.68

Gene sequence:

>393_bases
ATGTTAAATAAAATAAGAAAACAAAAAATAGGTGATAAAGAGTATTCTTTTAAAATGACTAATAGAACCATTAGAAAGAT
TGATGAAAAGTATGGTAATTATGGTTCTGTTATTTATGGGTTAATGGAAGGACAACAATTCTACACAAATGCTTTAAGAT
TAGTATCTATGTGTTGTGTAGATAAAGAAAAAGTACTTATAAATAAAGAAGAAAATACATATGAAGAAAAAATAAAAGAA
TGGGACATTGAAGAACTAGAAAATGTTATAACAGGACAGCAATATCAAGAAATTACAAACTTAGCAGTGGAGCTTTATAT
TGATTATATGGGATTGAATAAAAACAATGAAGAAGAAACAAAAAATAAAGAAGCTAAAAAAGAAAAAAACTAA

Upstream 100 bases:

>100_bases
TGTAATAATACCTACAGAGAAAAAAGAGAATATAGAAGGTTAATTTATGGGGTAGAAATAATCTACCCTTATTATTTTGT
TGATGAAAGGATTGGATAAT

Downstream 100 bases:

>100_bases
ATGACCAGTCGAAGTATGAAATTGACTTTGACTGGCTTTTTTATTTAGCAAAAGTACATTTAAATTATTCTAAAGAAGAA
TTTTGGGATAGTACACATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLNKIRKQKIGDKEYSFKMTNRTIRKIDEKYGNYGSVIYGLMEGQQFYTNALRLVSMCCVDKEKVLINKEENTYEEKIKE
WDIEELENVITGQQYQEITNLAVELYIDYMGLNKNNEEETKNKEAKKEKN

Sequences:

>Translated_130_residues
MLNKIRKQKIGDKEYSFKMTNRTIRKIDEKYGNYGSVIYGLMEGQQFYTNALRLVSMCCVDKEKVLINKEENTYEEKIKE
WDIEELENVITGQQYQEITNLAVELYIDYMGLNKNNEEETKNKEAKKEKN
>Mature_130_residues
MLNKIRKQKIGDKEYSFKMTNRTIRKIDEKYGNYGSVIYGLMEGQQFYTNALRLVSMCCVDKEKVLINKEENTYEEKIKE
WDIEELENVITGQQYQEITNLAVELYIDYMGLNKNNEEETKNKEAKKEKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15482; Mature: 15482

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKIRKQKIGDKEYSFKMTNRTIRKIDEKYGNYGSVIYGLMEGQQFYTNALRLVSMCCV
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHC
DKEKVLINKEENTYEEKIKEWDIEELENVITGQQYQEITNLAVELYIDYMGLNKNNEEET
CCCCEEECCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KNKEAKKEKN
HHHHHHCCCC
>Mature Secondary Structure
MLNKIRKQKIGDKEYSFKMTNRTIRKIDEKYGNYGSVIYGLMEGQQFYTNALRLVSMCCV
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHC
DKEKVLINKEENTYEEKIKEWDIEELENVITGQQYQEITNLAVELYIDYMGLNKNNEEET
CCCCEEECCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KNKEAKKEKN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA