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The map label for this gene is csoR [H]

Identifier: 226949953

GI number: 226949953

Start: 2916859

End: 2917128

Strand: Reverse

Name: csoR [H]

Synonym: CLM_2905

Alternate gene names: 226949953

Gene position: 2917128-2916859 (Counterclockwise)

Preceding gene: 226949954

Following gene: 226949950

Centisome position: 70.2

GC content: 31.11

Gene sequence:

>270_bases
ATGGAAAATCAAAAGAAAGATGCTAAAAAAGATATACAAACGAGACTTAGAAGGATTGAAGGACAGGTAAAAGGTATAGA
GAAAATGGTAGAAAATGAATGCTGTTGTAGAGATGTGCTTATACAGATAGCTGCTATAAGAGCTGCTATGAACAAAGTAG
GTGGTTTAGTTTTAGAAAATTATGCTAAACAGTGTTTTTTAGGAGGAGATAAGGAAAAAGATGAAGCTATAGAAGATTTA
GTTTCTACCTTTACTATGTTTATGAAATAA

Upstream 100 bases:

>100_bases
AAAGGTAAATTATAAATAAAATTGAAGGAATAATTAGAAAATGATATAATACCGGGTAGAGGTATAATTATAGTTGTAGT
AAAAAAGAGGAGTTTTAGTT

Downstream 100 bases:

>100_bases
GGAAAGTGCGTAGCACTTTCCTTATTTCATAACATGCCCCTTAATTATTTTTTACTTCATTCCAAATTACATTTTGGTAT
TTAATCTGGTATCTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MENQKKDAKKDIQTRLRRIEGQVKGIEKMVENECCCRDVLIQIAAIRAAMNKVGGLVLENYAKQCFLGGDKEKDEAIEDL
VSTFTMFMK

Sequences:

>Translated_89_residues
MENQKKDAKKDIQTRLRRIEGQVKGIEKMVENECCCRDVLIQIAAIRAAMNKVGGLVLENYAKQCFLGGDKEKDEAIEDL
VSTFTMFMK
>Mature_89_residues
MENQKKDAKKDIQTRLRRIEGQVKGIEKMVENECCCRDVLIQIAAIRAAMNKVGGLVLENYAKQCFLGGDKEKDEAIEDL
VSTFTMFMK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10128; Mature: 10128

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQKKDAKKDIQTRLRRIEGQVKGIEKMVENECCCRDVLIQIAAIRAAMNKVGGLVLEN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAKQCFLGGDKEKDEAIEDLVSTFTMFMK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MENQKKDAKKDIQTRLRRIEGQVKGIEKMVENECCCRDVLIQIAAIRAAMNKVGGLVLEN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAKQCFLGGDKEKDEAIEDLVSTFTMFMK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]