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The map label for this gene is udk [H]

Identifier: 226949909

GI number: 226949909

Start: 2864710

End: 2865330

Strand: Reverse

Name: udk [H]

Synonym: CLM_2861

Alternate gene names: 226949909

Gene position: 2865330-2864710 (Counterclockwise)

Preceding gene: 226949910

Following gene: 226949908

Centisome position: 68.96

GC content: 31.88

Gene sequence:

>621_bases
ATGAAACGTCCAGTGTTGATAGGTATAACTGGAGGGACTGGCTCAGGAAAAAGTACAGTGGCTAAGGAAATATATAATAA
ATTTGATGAAGCCTGTATTGCTATGATAGAACAGGACTCTTATTATAAAGATCAAAGCAGTATGCCTTTTGAGGAAAGAT
GCAAAAAAAACTATGATCATCCAGATGCTTTTGATAATGAACTTTTAATAGATCATTTAAAGAATTTAATAGACCTAAAT
GTTATAGAAAAGCCTATTTACGATTTTGAAGCTCATAATAGAAAAGAAGAAACTATAAAGGTGAAACCAAGGGACATTAT
AATTGTAGAAGGTATATTAGTGCTTCAAGATCCAAGGGTTAGAGAATTATTAGATATAAAGATATATGTGGATACAGATG
CAGATGTAAGAATAATAAGAAGACTTTTAAGGGATATAAACGAAAGAGGAAGAACTGTAGATTCAGTTATAAATCAATAC
TTAACCGTTGTAAGACCAATGCATATGCAATTTATAGAGCCTTCAAAAAGATACGCAGATATAATAATTCCAGAGGGTGG
ACACAATAGAGTAGCCGTAGACATGATGGTAGCAAATATAAAGCATTTGCTACAAGAATAA

Upstream 100 bases:

>100_bases
AAGAATACACCATTAATTTGTTATAATTTTAAATTTTATTATGCATAAAATGATTTAATTAAATGTTTAATAAAAAACTA
GAAAATGAGGGGGAAAGCTA

Downstream 100 bases:

>100_bases
GATCTTATTTAAAATGAAATAGCAATAATTTAGAATAAAACACCTTATTTTGGTTATAATTTAGCTAAAATGAGGTGTTT
TTATTATGAGATACAGGGAG

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKRPVLIGITGGTGSGKSTVAKEIYNKFDEACIAMIEQDSYYKDQSSMPFEERCKKNYDHPDAFDNELLIDHLKNLIDLN
VIEKPIYDFEAHNRKEETIKVKPRDIIIVEGILVLQDPRVRELLDIKIYVDTDADVRIIRRLLRDINERGRTVDSVINQY
LTVVRPMHMQFIEPSKRYADIIIPEGGHNRVAVDMMVANIKHLLQE

Sequences:

>Translated_206_residues
MKRPVLIGITGGTGSGKSTVAKEIYNKFDEACIAMIEQDSYYKDQSSMPFEERCKKNYDHPDAFDNELLIDHLKNLIDLN
VIEKPIYDFEAHNRKEETIKVKPRDIIIVEGILVLQDPRVRELLDIKIYVDTDADVRIIRRLLRDINERGRTVDSVINQY
LTVVRPMHMQFIEPSKRYADIIIPEGGHNRVAVDMMVANIKHLLQE
>Mature_206_residues
MKRPVLIGITGGTGSGKSTVAKEIYNKFDEACIAMIEQDSYYKDQSSMPFEERCKKNYDHPDAFDNELLIDHLKNLIDLN
VIEKPIYDFEAHNRKEETIKVKPRDIIIVEGILVLQDPRVRELLDIKIYVDTDADVRIIRRLLRDINERGRTVDSVINQY
LTVVRPMHMQFIEPSKRYADIIIPEGGHNRVAVDMMVANIKHLLQE

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI18699734, Length=213, Percent_Identity=44.131455399061, Blast_Score=196, Evalue=2e-50,
Organism=Homo sapiens, GI301129207, Length=207, Percent_Identity=42.9951690821256, Blast_Score=181, Evalue=4e-46,
Organism=Homo sapiens, GI57863312, Length=207, Percent_Identity=42.9951690821256, Blast_Score=181, Evalue=5e-46,
Organism=Homo sapiens, GI13899253, Length=215, Percent_Identity=40.9302325581395, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=40.1315789473684, Blast_Score=120, Evalue=1e-27,
Organism=Escherichia coli, GI87082034, Length=205, Percent_Identity=49.2682926829268, Blast_Score=217, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17539894, Length=208, Percent_Identity=38.9423076923077, Blast_Score=174, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17539892, Length=208, Percent_Identity=38.9423076923077, Blast_Score=174, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI71981181, Length=219, Percent_Identity=36.5296803652968, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6324339, Length=195, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6320223, Length=211, Percent_Identity=28.436018957346, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221458995, Length=217, Percent_Identity=42.8571428571429, Blast_Score=185, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24649624, Length=216, Percent_Identity=43.0555555555556, Blast_Score=184, Evalue=3e-47,
Organism=Drosophila melanogaster, GI28573516, Length=204, Percent_Identity=43.1372549019608, Blast_Score=181, Evalue=3e-46,
Organism=Drosophila melanogaster, GI28573514, Length=204, Percent_Identity=43.1372549019608, Blast_Score=181, Evalue=3e-46,
Organism=Drosophila melanogaster, GI28573512, Length=204, Percent_Identity=43.1372549019608, Blast_Score=181, Evalue=3e-46,
Organism=Drosophila melanogaster, GI45550449, Length=204, Percent_Identity=43.1372549019608, Blast_Score=181, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 23892; Mature: 23892

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPVLIGITGGTGSGKSTVAKEIYNKFDEACIAMIEQDSYYKDQSSMPFEERCKKNYDH
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
PDAFDNELLIDHLKNLIDLNVIEKPIYDFEAHNRKEETIKVKPRDIIIVEGILVLQDPRV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECEEEECCCCH
RELLDIKIYVDTDADVRIIRRLLRDINERGRTVDSVINQYLTVVRPMHMQFIEPSKRYAD
HEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IIIPEGGHNRVAVDMMVANIKHLLQE
EEEECCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRPVLIGITGGTGSGKSTVAKEIYNKFDEACIAMIEQDSYYKDQSSMPFEERCKKNYDH
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
PDAFDNELLIDHLKNLIDLNVIEKPIYDFEAHNRKEETIKVKPRDIIIVEGILVLQDPRV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECEEEECCCCH
RELLDIKIYVDTDADVRIIRRLLRDINERGRTVDSVINQYLTVVRPMHMQFIEPSKRYAD
HEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IIIPEGGHNRVAVDMMVANIKHLLQE
EEEECCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA