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The map label for this gene is ysnF [H]

Identifier: 226949901

GI number: 226949901

Start: 2857777

End: 2858445

Strand: Reverse

Name: ysnF [H]

Synonym: CLM_2850

Alternate gene names: 226949901

Gene position: 2858445-2857777 (Counterclockwise)

Preceding gene: 226949902

Following gene: 226949899

Centisome position: 68.79

GC content: 30.19

Gene sequence:

>669_bases
ATGGTGAACAAGGATGTACCTAATATAGGAAGTAGTGGATATTTAACAAGTGCTATTATTGGAGGAATAATTGGTTTTAT
AATTGCTATTTTGTTTAAGTTCTCTATTTTAACTATACCTGGATTTGTAACTATATTTACAATTACATCAATTGCCCCAA
TAATAACCGGAACTATATTAGGCATTGTTGTGGGCTTAATTATATGTAGGCTAATGCTTCAGAGTAAGATATATGAGAAC
GATATCGAAAATAATCCTTACAATTCAGATAGTGATATGAAGATGCAACTTCGCGAAGAACAGATAGAAATGTCTAAGAA
AAAAATACAAACTGGTGAGGTATCTATTCACAAAGAAGTTTTAACTGAAGAAAAGAATATTACTGTACCTGTAAAACGTG
AGGAACTTGTTATTGAAAATACTGTTTGTGATCCACAATTTCATGATAAATCAGATGGTCATACTGAAACTATTCGTATT
CCTATAAGAGAAGAACGTATTGACATACACAAGCAACCAGTAACTTTAGAAGATGTTTCAGTTAAAAATCATCAATATGA
AGAGGTAAAACATATAACTGAAACATTAAAAAAGGAAGTACCCTATATTAGTGTTAATGGAGATGCAAAAATTGTGGATA
AGGAAATCGATAAAAAATATCAAAGATAG

Upstream 100 bases:

>100_bases
TACAGATGAAGGCTTCCATTAAATAATTTATAAAATAAATAAAAAAACACCTCTCAAATTGTATATCAGATTTAAGAGGT
GTTTTTTAGGAGGATAAAGC

Downstream 100 bases:

>100_bases
AAATATGGGATAATTAATAGCTCTAAACACTTTCTGATTGCAAAAAGGGAGGATTAGGAAGTATTTTGTTTAACGTCATA
ACTGAAAAATGCACAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVNKDVPNIGSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTILGIVVGLIICRLMLQSKIYEN
DIENNPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEVLTEEKNITVPVKREELVIENTVCDPQFHDKSDGHTETIRI
PIREERIDIHKQPVTLEDVSVKNHQYEEVKHITETLKKEVPYISVNGDAKIVDKEIDKKYQR

Sequences:

>Translated_222_residues
MVNKDVPNIGSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTILGIVVGLIICRLMLQSKIYEN
DIENNPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEVLTEEKNITVPVKREELVIENTVCDPQFHDKSDGHTETIRI
PIREERIDIHKQPVTLEDVSVKNHQYEEVKHITETLKKEVPYISVNGDAKIVDKEIDKKYQR
>Mature_222_residues
MVNKDVPNIGSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTILGIVVGLIICRLMLQSKIYEN
DIENNPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEVLTEEKNITVPVKREELVIENTVCDPQFHDKSDGHTETIRI
PIREERIDIHKQPVTLEDVSVKNHQYEEVKHITETLKKEVPYISVNGDAKIVDKEIDKKYQR

Specific function: Unknown

COG id: COG3861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011756
- InterPro:   IPR019060 [H]

Pfam domain/function: PF09557 DUF2382 [H]

EC number: NA

Molecular weight: Translated: 25177; Mature: 25177

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKDVPNIGSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVVGLIICRLMLQSKIYENDIENNPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LTEEKNITVPVKREELVIENTVCDPQFHDKSDGHTETIRIPIREERIDIHKQPVTLEDVS
HCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEECCC
VKNHQYEEVKHITETLKKEVPYISVNGDAKIVDKEIDKKYQR
CCCCHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHCC
>Mature Secondary Structure
MVNKDVPNIGSSGYLTSAIIGGIIGFIIAILFKFSILTIPGFVTIFTITSIAPIITGTIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVVGLIICRLMLQSKIYENDIENNPYNSDSDMKMQLREEQIEMSKKKIQTGEVSIHKEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LTEEKNITVPVKREELVIENTVCDPQFHDKSDGHTETIRIPIREERIDIHKQPVTLEDVS
HCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEECCC
VKNHQYEEVKHITETLKKEVPYISVNGDAKIVDKEIDKKYQR
CCCCHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 10568751; 11988534 [H]