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The map label for this gene is yfiH [C]

Identifier: 226949884

GI number: 226949884

Start: 2842920

End: 2843639

Strand: Reverse

Name: yfiH [C]

Synonym: CLM_2833

Alternate gene names: 226949884

Gene position: 2843639-2842920 (Counterclockwise)

Preceding gene: 226949885

Following gene: 226949883

Centisome position: 68.43

GC content: 25.14

Gene sequence:

>720_bases
ATGAATTTTGAAAAAATTAATGTAGGTGCATATACATTTCTAAAATCGGAATTTAAAAATGCTAATTTTATATTTTCTAC
TGGAGAAAATCATCTGAATTTTAATAAAAATATAGATGAAGGAAAAGAAAATTTGAATAATATAAAAAAATGGTTTTTAT
TAGAGGAAGTATGTTATTTAGATCAAGTACACAGTAGTATAGTTAGAAATTTTAAGGATAAAGATAAAGAGGGAGATGCA
ATAATAACTAATAAATTTAATAGAGCTGTAGGTGTTTTTACAGCAGATTGTGTTCCTATATTGTTATATGATAAAGAAAA
TGAGGCAATAGGTGCGGTTCACAGTGGCTGGAGAGGTACCTATGAAAATATAGTCATAAATACCTTAAAGAAAATGAAAG
AAAATTATAATACAAAAACAGAAAATATTATAGCTTCAATAGGTCCACATATAAAAGATTGTTGCTATGAAGTTAGTTAT
GAGTTAATAAATAAGTTTAAAGAAGACAAAATATATAATGATTATAATATAAACTATAAAAGAAATTTAAATATGGAAGC
ATGTATATTGGCACAACTAAGCAATGTAGGGGTTAAAAATGAAAATATAATTAGAGCAAACTTATGTACTATGTGTAGTT
CTGATCCTAAATTTTATTCCTATAGAAAAGAGGGGAATATAGGAAGACAATTTTCCTTTGTATATTTAAACAAACAGTAG

Upstream 100 bases:

>100_bases
AGTTAGAAACGCTATGTTAAAATAAAGTTAAAAAAAATATATATTTGAAAAATAATATAAAATTAATGATAATATATTTA
TAGGAAGGATGATGTGTCTT

Downstream 100 bases:

>100_bases
GAGGGGTACCATGGCTATGGAAAAAATACTTATAGTAGACGATGAAGAACATATATGTGAATTAATAAAATTTAATTTAG
AAAATAATGGCTATAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ

Sequences:

>Translated_239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
>Mature_239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=171, Percent_Identity=29.8245614035088, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI190194372, Length=171, Percent_Identity=29.8245614035088, Blast_Score=88, Evalue=8e-18,
Organism=Escherichia coli, GI1788945, Length=192, Percent_Identity=29.6875, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27737; Mature: 27737

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYL
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQVHSSIVRNFKDKDKEGDAIITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGT
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHCCCCCH
YENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSYELINKFKEDKIYNDYNINYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
ECCCHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYL
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQVHSSIVRNFKDKDKEGDAIITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGT
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHCCCCCH
YENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSYELINKFKEDKIYNDYNINYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
ECCCHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961408; 11466286 [H]