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The map label for this gene is yloC [H]

Identifier: 226949869

GI number: 226949869

Start: 2825822

End: 2826700

Strand: Reverse

Name: yloC [H]

Synonym: CLM_2816

Alternate gene names: 226949869

Gene position: 2826700-2825822 (Counterclockwise)

Preceding gene: 226949870

Following gene: 226949868

Centisome position: 68.03

GC content: 27.65

Gene sequence:

>879_bases
ATGGTTAAAAGTATGACGGGTTTTGGTAGAGGTTTTTTAGAACAGGATAAAAAAAGTTTTACTGTAGAAATGAAAAGTGT
AAACCATAGATACTGTGATATAAACATAAGAATGCCTAAAGTATTTATGGCTTTAGAAGAAAAAATGAGGGCTACAATAC
AAGAAAAAGTACATAGAGGTAAAATTGATATTTATATCACAGTAAATACATATGATAAAGATGATGTAGAACTTATATAC
AATGAAACCTTATCAGACAATTATTATGAATGCTTAAAAAAGATAAGTGGAAGATATGATGTTAAAAACGACATATCAGT
ATCTTTAATAGGAAGATTTCCAGAAGTAATAACTGTAAAACAAAAAGAAGAGGATTTAGAGGAAGTTTGGAAAAGTTTAA
ATACTCCGCTGAAAGAAGCGGTGGATGCTTTGGTATCCATGAGAGAGAGGGAGGGTAGTAAATTATATAAAGACATAAAT
ATAAAATGTGATGAAATAAAAAAGATGGTTGATAGAATAGAGGAAAAGGCACCAAAAGTAGTGAATGAATATAATAAAAA
AATTCATGAAAGAGTAAGTGAGCTTTTATCTCAATCAGAAATCGATGAAAGTAGAATAGCTATGGAAGTAGCATTATTTG
TTGATAAGTCTTCTGTAGATGAAGAAATAGTTAGATTGAACAGTCATATAAATCAAGTATCAGAAACCCTTAATTTAAAA
GAACCTGTAGGAAGAAAATTAGATTTTATAGTTCAAGAGATGAATAGAGAAGCAAATACTATAGCTTCTAAATCTACAGA
CCTTGAAATAGTTAATTTAGTATTAAATATAAAAAATTATATAGAAAAAATTAGAGAGCAAATTCAAAATATAGAATAA

Upstream 100 bases:

>100_bases
AAAAACAGAGTATTTTAAAGTAAAATAGAGATTATGTTGTAAATATCCTTTAGTTTATGTATAATTATCATATCTGGCTG
TTTGTGGAAGGATGGAGAAT

Downstream 100 bases:

>100_bases
TTAGGAGGATTTTTAATGGCAATAAAATTAATAAACATAGGATTTGGTAATATAGTTTCAGCTAATAGATTAGTTGCAAT
AGTAAGCCCAGAGTCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKVFMALEEKMRATIQEKVHRGKIDIYITVNTYDKDDVELIY
NETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVKQKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDIN
IKCDEIKKMVDRIEEKAPKVVNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE

Sequences:

>Translated_292_residues
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKVFMALEEKMRATIQEKVHRGKIDIYITVNTYDKDDVELIY
NETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVKQKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDIN
IKCDEIKKMVDRIEEKAPKVVNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE
>Mature_292_residues
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKVFMALEEKMRATIQEKVHRGKIDIYITVNTYDKDDVELIY
NETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVKQKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDIN
IKCDEIKKMVDRIEEKAPKVVNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=292, Percent_Identity=31.5068493150685, Blast_Score=147, Evalue=9e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34065; Mature: 34065

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKVFMALEEKMRATIQEKVHRG
CCCCCCCCCCHHHHHCCHHHEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
KIDIYITVNTYDKDDVELIYNETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVK
CEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHEEEH
QKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDINIKCDEIKKMVDRIEEKAPKV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE
HHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKVFMALEEKMRATIQEKVHRG
CCCCCCCCCCHHHHHCCHHHEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
KIDIYITVNTYDKDDVELIYNETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVK
CEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHEEEH
QKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDINIKCDEIKKMVDRIEEKAPKV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE
HHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]