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The map label for this gene is yhcC [C]

Identifier: 226949807

GI number: 226949807

Start: 2761570

End: 2762661

Strand: Reverse

Name: yhcC [C]

Synonym: CLM_2747

Alternate gene names: 226949807

Gene position: 2762661-2761570 (Counterclockwise)

Preceding gene: 226949808

Following gene: 226949806

Centisome position: 66.49

GC content: 29.21

Gene sequence:

>1092_bases
ATGAGTAAAAGCCATTATATAATACCAATATTCGTTGCTCAGGAAGGATGTCCACATAATTGTGTTTTTTGTAATCAACA
TAAAATAACCGGGGAAAAGGATGAAATGATAGACGAAAATTATGTGAGAGAAACCATAGAAGCTTATATAAAGACTATAG
ATAGAGAAAATTCAACTTTAGAGGTTTCTTTTTTTGGAGGCACTTTTACAGGTATACCTATAGAAAGACAAAAAAGTCTT
TTAAAAGTAGCAAAGGAATATAAGGATAAGGGCCAAATAGATTATATACATATGTCCACAAGACCAGATTATATAGACAG
AGAAATTTTAGATAATCTTAAAGAATACTCTGCGGATATAATTGAATTAGGAGTTCAATCTTTAGATGATGAAGTTCTTT
TAAAATCAGGAAGAGGACATTCTGTAGAAGAGGTACATAGAGCTTCAAAGCTTATAAGAGAATACGGATTTACTTTGGGA
CATCAAATAATGTTAGGACTTCCGGGAGATACTTTTAAAAAGGATATAGAAACGGTAGCAAAATCTTTAGAGATGGAACC
AGACATAGCAAGAATATACCCAGCCTTAGTAATAAAGGACACTCCTATGGAAGATATGTTAAAAAAGGGAACCTATAAGC
CTTATACTTTAGATGAAGCTATAGATATAACTATGCTATTATATTCCATGTATGAAGAACAAGACGTAAAGGTAATAAGA
ATAGGACTTCAACCTACAGAAGAAATAAATGAAAATAAGGATGTGCTAGGAGGTCCTTTCCATCCAGCTTTTAGAGAATT
AGTGGAGGGAAAAATAATTAATGAGGCTATTTTCTCTCATGTGGAAGATAGTTCAGAAGAAAATTTAGAAATTTATATAA
ATAATAAAGATATATCTAAATTGTATTGTAATAAAAAACAATTTTTCAATGAATTTATAGATAAAAAAAATGTGAAAAGA
TTTAAAGTTATACAAGATGAAACATTAAATAGAGGGAATATAATTATTAAAAAGGGTGAAAATCAAGAACATATATTTAT
AAAAGAGTATATGAGAAAGCTTTCAGAAGAAGGAAAAAACTTATTTATATAG

Upstream 100 bases:

>100_bases
ACCATAGATAATGAGGTAAGAGGAACTGGAATAGGCTATAGTAAAAAAGAAGCAGAACAAAACGCAGCAAGAGAAGCATT
AAAGAATTTAGGTGATAGCC

Downstream 100 bases:

>100_bases
AATAATATAAGTACCAAGTTAATATAAGCTTTAATGTCCCCACTGTTTCATATTCAGTGGGGATATATATTTTAAGTTTT
ACTAATTGATATTTTTTTTT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSKSHYIIPIFVAQEGCPHNCVFCNQHKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIERQKSL
LKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLG
HQIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNEFIDKKNVKR
FKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKNLFI

Sequences:

>Translated_363_residues
MSKSHYIIPIFVAQEGCPHNCVFCNQHKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIERQKSL
LKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLG
HQIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNEFIDKKNVKR
FKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKNLFI
>Mature_362_residues
SKSHYIIPIFVAQEGCPHNCVFCNQHKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIERQKSLL
KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGH
QIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI
GLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNEFIDKKNVKRF
KVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKNLFI

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=269, Percent_Identity=24.1635687732342, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI2367204, Length=196, Percent_Identity=23.469387755102, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI133955098, Length=269, Percent_Identity=23.0483271375465, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6325171, Length=269, Percent_Identity=24.1635687732342, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19920684, Length=269, Percent_Identity=24.5353159851301, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006638
- InterPro:   IPR005910
- InterPro:   IPR007197 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42082; Mature: 41950

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSHYIIPIFVAQEGCPHNCVFCNQHKITGEKDEMIDENYVRETIEAYIKTIDRENSTL
CCCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
EVSFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADI
EEEEECCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVA
HHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCHHCCEEEEECCCHHHHHHHHHHH
KSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
HHCCCCCCHHHHCHHHEEECCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEE
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISK
ECCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
LYCNKKQFFNEFIDKKNVKRFKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKN
HHHCHHHHHHHHHHHCCCHHHEEEHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCC
LFI
CCC
>Mature Secondary Structure 
SKSHYIIPIFVAQEGCPHNCVFCNQHKITGEKDEMIDENYVRETIEAYIKTIDRENSTL
CCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
EVSFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADI
EEEEECCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVA
HHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCHHCCEEEEECCCHHHHHHHHHHH
KSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
HHCCCCCCHHHHCHHHEEECCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEE
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISK
ECCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
LYCNKKQFFNEFIDKKNVKRFKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKN
HHHCHHHHHHHHHHHCCCHHHEEEHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCC
LFI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]