Click here to switch to the map view.

The map label for this gene is spoVS [H]

Identifier: 226949755

GI number: 226949755

Start: 2704964

End: 2705224

Strand: Reverse

Name: spoVS [H]

Synonym: CLM_2695

Alternate gene names: 226949755

Gene position: 2705224-2704964 (Counterclockwise)

Preceding gene: 226949756

Following gene: 226949754

Centisome position: 65.1

GC content: 37.93

Gene sequence:

>261_bases
ATGGAAGTATTAAAAGTTTCAGCAAAATCAAGTCCAAATTCAGTAGCAGGTGCTTTAGCAGGGGTACTAAGAGAAAGAGG
TGCTGCTGAAATACAAGCAATAGGAGCAGGGGCTATTAATCAAGCAATTAAGGCAGTAGCTATAGCAAGAGGTTTTGTGG
CTCCAAGTGGAATCGATTTAATTTGTATACCAGCCTTTACTGATATAGAAATCGATGGCGAAGAAAGAACTGCTATTAAA
TTAATAGTTCAGCCAAGATAA

Upstream 100 bases:

>100_bases
TGCTAAAATTTACAAAATTTAAAAGGAATTTTTAATTTTTTGTAGAATAGATATATGTAAGTAAGACTATTAAATTAAAG
TTAAAATAGGAGGTTTACTT

Downstream 100 bases:

>100_bases
TAATTAAAAACATAAAACAAAAGGGCTTGAATTTATATTCAAGTCCTTTAATTTATTTCAAAAGTGTGATAAATTATATG
TTAGTTATATTTTTATACTA

Product: stage V sporulation protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MEVLKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGAINQAIKAVAIARGFVAPSGIDLICIPAFTDIEIDGEERTAIK
LIVQPR

Sequences:

>Translated_86_residues
MEVLKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGAINQAIKAVAIARGFVAPSGIDLICIPAFTDIEIDGEERTAIK
LIVQPR
>Mature_86_residues
MEVLKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGAINQAIKAVAIARGFVAPSGIDLICIPAFTDIEIDGEERTAIK
LIVQPR

Specific function: Induced early in sporulation under the control of sigma- H. Interferes with sporulation at an early stage. Seems to play a positive role in allowing cells to progress beyond stage V of sporulation [H]

COG id: COG2359

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007347
- ProDom:   PD061837 [H]

Pfam domain/function: PF04232 SpoVS [H]

EC number: NA

Molecular weight: Translated: 8810; Mature: 8810

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGAINQAIKAVAIARGFVAPSGIDL
CCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCE
ICIPAFTDIEIDGEERTAIKLIVQPR
EEECCEECEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MEVLKVSAKSSPNSVAGALAGVLRERGAAEIQAIGAGAINQAIKAVAIARGFVAPSGIDL
CCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCE
ICIPAFTDIEIDGEERTAIKLIVQPR
EEECCEECEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559352; 9384377 [H]