| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949742
Identifier: 226949742
GI number: 226949742
Start: 2693850
End: 2694623
Strand: Reverse
Name: 226949742
Synonym: CLM_2682
Alternate gene names: NA
Gene position: 2694623-2693850 (Counterclockwise)
Preceding gene: 226949743
Following gene: 226949741
Centisome position: 64.85
GC content: 29.84
Gene sequence:
>774_bases ATGGAAAAGGTAGTTTTAAAGGTAGAAAATGGACAACCAGTAGTAAGTAGTAGAGAAGTTGCAGATGATTTTGGGAAAAG ACATTCTCATGTAGTTGAAGCTATTGATAATAAAATAGAAAGTTTAACTGCCGAAAATTCGGAGGTTAAGATTTCAAAGT TATTCATACCAACAACTTTTAATCATAATGGCAATGACTACAAGGAATATTTGTTAACTAGAGATGGATTTACATTTATA GTTATGGGGTTTACAGGAGCCAAAGCTGATAGTTGGAAATTTAAATATATTGAAGCATTTAATAAGATGGAGCAATACAT TAAAGAAAAGCAAAAACCTAAATGCATAGAAGATGTGCTTATACAAAGTTTACAAGAAATGAAAGATGTCAAATATCAGT TAGAAACAGTTAAGAGAGAAGGTAAAGAAACCAAAGAAGAGGTACAAGCTATTAGAGATGTAGTTAAATTAGATACTACA TCATGGAAAGAAGATTCTACTAAATTAATAAATAAAATAGCTCAAACTCTTGGTGGAAATGAATACATCAGGGAAGTAAG AAGAGAGATTTATAAATTACTAGATAAAAGAATGGGTGTTAATTTAGAACAAAGACTTATTAATAAACGTAGAAGAATGG CAGATGAAGGAGTATGTAAATCTAAAAGAGATAAATTAAATAAAGTAAGCGTAATAGGTGATGATAAGAAACTTATAGAG GGCTATGTATACATAGTTAAGGAAATGGCTATTAAATACGGGGTAAAAGCTTAG
Upstream 100 bases:
>100_bases TTTAGGTTCTGATTTAAACGAATTTAAAAAGAACAAATGATAATTTTAAATACTTACAGATGTAAAGTAATTAACTTTAA ATTTTATAGGAGGTAAAAGC
Downstream 100 bases:
>100_bases GGGGTGTAGATATTGACCGCAGTAGGACAAGCTATAACAACACTATATAGTCTGATTGCAATAACAGCTCTTATGATACT AGATTTAAAAAGATTACTAA
Product: Gp26 protein
Products: NA
Alternate protein names: Rha Family Phage Regulatory Protein; Phage Regulatory Protein Rha Family; Phage Anti-Repressor; Phage-Encoded Protein-Like; Phage Protein; Phage Related Protein; Phage-Like Protein; Phage Associated Conserved Protein; Gp26 Protein; Phage-Related Antirepressor; Xin-Antitoxin System Toxin Component Bro Family; Phage Regulatory Protein; Phage Immunity Protein; Anti-Repressor
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTFNHNGNDYKEYLLTRDGFTFI VMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVLIQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTT SWKEDSTKLINKIAQTLGGNEYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE GYVYIVKEMAIKYGVKA
Sequences:
>Translated_257_residues MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTFNHNGNDYKEYLLTRDGFTFI VMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVLIQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTT SWKEDSTKLINKIAQTLGGNEYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE GYVYIVKEMAIKYGVKA >Mature_257_residues MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTFNHNGNDYKEYLLTRDGFTFI VMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVLIQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTT SWKEDSTKLINKIAQTLGGNEYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE GYVYIVKEMAIKYGVKA
Specific function: Unknown
COG id: COG3561
COG function: function code K; Phage anti-repressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29841; Mature: 29841
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTF CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC NHNGNDYKEYLLTRDGFTFIVMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVL CCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH IQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTTSWKEDSTKLINKIAQTLGGN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH EYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCHHEEEECCHHHHHH GYVYIVKEMAIKYGVKA HHHHHHHHHHHHHCCCC >Mature Secondary Structure MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTF CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC NHNGNDYKEYLLTRDGFTFIVMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVL CCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH IQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTTSWKEDSTKLINKIAQTLGGN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH EYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCHHEEEECCHHHHHH GYVYIVKEMAIKYGVKA HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA