| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949731
Identifier: 226949731
GI number: 226949731
Start: 2686417
End: 2687442
Strand: Reverse
Name: 226949731
Synonym: CLM_2671
Alternate gene names: NA
Gene position: 2687442-2686417 (Counterclockwise)
Preceding gene: 226949732
Following gene: 226949730
Centisome position: 64.68
GC content: 26.9
Gene sequence:
>1026_bases ATGGATAAAATTAGAGATATTTTAATAAATGAAGCAGTACTTCATGTACTGGACAATAATTCAGATGAACCTATATTAAA TAATTATAAAATAGCCCTTAATGATGAAGTGTATAAATTTATTCTAAGTCATATTGAAAGGATACTTAAAGATAATGATT TAAAATATGCAATATTTAAAGAAAGTAGTACTGTGATAAGAGAAACTAGTCAGGACTATTTAAATGGACAGATTGATTTA CTTGAAGCTTCAAATTGTGTAGCTAATAGCCTATTTAGTTTTATGAAATCTGATATTAATATACCATCTTGCAATTTATT TGTTGTATCTATTAGTACTGAGTATGGTCCTATGTTAGGAATACTTAAGCTTGATTATATTAAACAATATGCACATGAGA TTGATTTTATTGATGATCATGTAGTGATTAATATAACTCCTATAACAACAGGATTACCAGCAACTAAAAAAGTTCAAAAG GCTGCTTTTATTAGACCTATATGTAATGGCGAAGAGTATAATCTTTTGGTACTTGATAAAGTTAAAAGTAAGAAAAGTGA TGAATATGGAACCGACTATTTTACAGAAAAATTCCTCGAATGCCTATTAATTGATAATGATAGAGATAATACAAGAGTTT TTATGAATACGGTAGAGAATTGGACAAGAAGTAATTTAAAAGAAGATGCAGTAAAGGCAGAGGAAATAAGAAGTTTTGCT AAAAGTGAGCTTAAAGAAAATGAAGAAATAGACATATATGATTTTGCTTCAAAGGTTTTACCTTTTGAAGAAAGTAAGAA AGATTTTATTGCTTATATGCAAGCCAATGATATTGAAAAGGTAAAAGTTGATAAAGAATATTTAGAAAAAAGACTTAGTA AATTAAAACTTAAGATAGATAGTGATATCGAAATTAGTATAACTGAAGAAGCTTATAGAGATATTAATAGATTTGGCATT CAAAATAATGGGGATGGATCCATAACCTTTATGATAAAAAATGTAGATAGATATGTAGAGAAATAG
Upstream 100 bases:
>100_bases GAAGCATTAAATCAATACCCAGAACTATTAGAAGAATCTAAACTAATAACAAAAATACAATAATCTAAATAAAAAAATTT ATAAGGAGAGTGTAAAATTT
Downstream 100 bases:
>100_bases GATAAATAGAAAGAACATTCTTTTATATAGAAAAGAGGTGATACTTTGGAAGCCTATAAAACAGAAGATAAGCCTAAGAT TAAACATGACGGATCCATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDKIRDILINEAVLHVLDNNSDEPILNNYKIALNDEVYKFILSHIERILKDNDLKYAIFKESSTVIRETSQDYLNGQIDL LEASNCVANSLFSFMKSDINIPSCNLFVVSISTEYGPMLGILKLDYIKQYAHEIDFIDDHVVINITPITTGLPATKKVQK AAFIRPICNGEEYNLLVLDKVKSKKSDEYGTDYFTEKFLECLLIDNDRDNTRVFMNTVENWTRSNLKEDAVKAEEIRSFA KSELKENEEIDIYDFASKVLPFEESKKDFIAYMQANDIEKVKVDKEYLEKRLSKLKLKIDSDIEISITEEAYRDINRFGI QNNGDGSITFMIKNVDRYVEK
Sequences:
>Translated_341_residues MDKIRDILINEAVLHVLDNNSDEPILNNYKIALNDEVYKFILSHIERILKDNDLKYAIFKESSTVIRETSQDYLNGQIDL LEASNCVANSLFSFMKSDINIPSCNLFVVSISTEYGPMLGILKLDYIKQYAHEIDFIDDHVVINITPITTGLPATKKVQK AAFIRPICNGEEYNLLVLDKVKSKKSDEYGTDYFTEKFLECLLIDNDRDNTRVFMNTVENWTRSNLKEDAVKAEEIRSFA KSELKENEEIDIYDFASKVLPFEESKKDFIAYMQANDIEKVKVDKEYLEKRLSKLKLKIDSDIEISITEEAYRDINRFGI QNNGDGSITFMIKNVDRYVEK >Mature_341_residues MDKIRDILINEAVLHVLDNNSDEPILNNYKIALNDEVYKFILSHIERILKDNDLKYAIFKESSTVIRETSQDYLNGQIDL LEASNCVANSLFSFMKSDINIPSCNLFVVSISTEYGPMLGILKLDYIKQYAHEIDFIDDHVVINITPITTGLPATKKVQK AAFIRPICNGEEYNLLVLDKVKSKKSDEYGTDYFTEKFLECLLIDNDRDNTRVFMNTVENWTRSNLKEDAVKAEEIRSFA KSELKENEEIDIYDFASKVLPFEESKKDFIAYMQANDIEKVKVDKEYLEKRLSKLKLKIDSDIEISITEEAYRDINRFGI QNNGDGSITFMIKNVDRYVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39478; Mature: 39478
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIRDILINEAVLHVLDNNSDEPILNNYKIALNDEVYKFILSHIERILKDNDLKYAIFK CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEE ESSTVIRETSQDYLNGQIDLLEASNCVANSLFSFMKSDINIPSCNLFVVSISTEYGPMLG CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHH ILKLDYIKQYAHEIDFIDDHVVINITPITTGLPATKKVQKAAFIRPICNGEEYNLLVLDK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEC VKSKKSDEYGTDYFTEKFLECLLIDNDRDNTRVFMNTVENWTRSNLKEDAVKAEEIRSFA CCCCCCCCCCCHHHHHHHHHEEEECCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHH KSELKENEEIDIYDFASKVLPFEESKKDFIAYMQANDIEKVKVDKEYLEKRLSKLKLKID HHHHCCCCCEEHHHHHHHHCCCCCCCCHHEEEHCCCCCHHEECCHHHHHHHHHHEEEEEC SDIEISITEEAYRDINRFGIQNNGDGSITFMIKNVDRYVEK CCEEEEECHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHCC >Mature Secondary Structure MDKIRDILINEAVLHVLDNNSDEPILNNYKIALNDEVYKFILSHIERILKDNDLKYAIFK CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEE ESSTVIRETSQDYLNGQIDLLEASNCVANSLFSFMKSDINIPSCNLFVVSISTEYGPMLG CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHH ILKLDYIKQYAHEIDFIDDHVVINITPITTGLPATKKVQKAAFIRPICNGEEYNLLVLDK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEC VKSKKSDEYGTDYFTEKFLECLLIDNDRDNTRVFMNTVENWTRSNLKEDAVKAEEIRSFA CCCCCCCCCCCHHHHHHHHHEEEECCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHH KSELKENEEIDIYDFASKVLPFEESKKDFIAYMQANDIEKVKVDKEYLEKRLSKLKLKID HHHHCCCCCEEHHHHHHHHCCCCCCCCHHEEEHCCCCCHHEECCHHHHHHHHHHEEEEEC SDIEISITEEAYRDINRFGIQNNGDGSITFMIKNVDRYVEK CCEEEEECHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA