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The map label for this gene is 226949724

Identifier: 226949724

GI number: 226949724

Start: 2680246

End: 2680815

Strand: Reverse

Name: 226949724

Synonym: CLM_2664

Alternate gene names: NA

Gene position: 2680815-2680246 (Counterclockwise)

Preceding gene: 226949726

Following gene: 226949723

Centisome position: 64.52

GC content: 30.53

Gene sequence:

>570_bases
GTGAAGCTAACACCAAAACAGAAAATATTTTGTGATGAATATCTAGTGGATCTCAATGCCACTAGAGCATATAAAGCGGC
TTATAAAAATATTAAAAAAGATGAAACAGCAGCGGTCAATGGAAATAGATTGCTAAGAAATGCTAAGGTTAAAGAGTACA
TTGATAAAAGAATGAAAGATAGAGAAAAAAGAACAGAAATAACTCAAGACTTTGTTTTAAAGGAGCTTTATGCTATAGCT
AAATCTAATGGTTCTAATTATGCGGAAGTAGTTAAAAAGTCTTATATGAAACCTGTTTATGATGAACAAGGAAATAAAAT
AGGTGAAGAAGAAGTTTTTTATAAAGATGTAGAAATAAAAGAAACGAAAGACCTTACAACTAATGAAAAGAAAGCTATAA
CAGCAATTAAAAATACTAAGTTTGGTATTAGTGTAGAAACAGCAGATAAGGTAAAGGCCTTAGAGCTTTTAGGTAGACAC
CTAGGAATGTTTAAGGATAAAGTAGAAGTTAATGGTAGTCTATGCAATGAAATCAGTATAACAATAGATGGTGAAGAGTA
TGGGACTTAA

Upstream 100 bases:

>100_bases
GTAAGACAGAGATAAGTTAAGTTATACACAATAAGTTGTGTATAATGTGCATAACTCATACTATATGTTGTGGTTTTATT
ATAAAAAGGAGAGTGGCATT

Downstream 100 bases:

>100_bases
GCTTGATATTAGCTCAAAAGTATTTAATGAAATATATTTAAAACATCAACTTAATAATAATAAACGTTATCAGATTTACT
TTGGAGGTTCATCCTCAGGT

Product: putative phage terminase small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Bacteriophage Terminase Small Subunit; Phage Terminase Small Subunit PBSX Family; Pbsx Phage Terminase Small Subunit

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKLTPKQKIFCDEYLVDLNATRAYKAAYKNIKKDETAAVNGNRLLRNAKVKEYIDKRMKDREKRTEITQDFVLKELYAIA
KSNGSNYAEVVKKSYMKPVYDEQGNKIGEEEVFYKDVEIKETKDLTTNEKKAITAIKNTKFGISVETADKVKALELLGRH
LGMFKDKVEVNGSLCNEISITIDGEEYGT

Sequences:

>Translated_189_residues
MKLTPKQKIFCDEYLVDLNATRAYKAAYKNIKKDETAAVNGNRLLRNAKVKEYIDKRMKDREKRTEITQDFVLKELYAIA
KSNGSNYAEVVKKSYMKPVYDEQGNKIGEEEVFYKDVEIKETKDLTTNEKKAITAIKNTKFGISVETADKVKALELLGRH
LGMFKDKVEVNGSLCNEISITIDGEEYGT
>Mature_189_residues
MKLTPKQKIFCDEYLVDLNATRAYKAAYKNIKKDETAAVNGNRLLRNAKVKEYIDKRMKDREKRTEITQDFVLKELYAIA
KSNGSNYAEVVKKSYMKPVYDEQGNKIGEEEVFYKDVEIKETKDLTTNEKKAITAIKNTKFGISVETADKVKALELLGRH
LGMFKDKVEVNGSLCNEISITIDGEEYGT

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21609; Mature: 21609

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTPKQKIFCDEYLVDLNATRAYKAAYKNIKKDETAAVNGNRLLRNAKVKEYIDKRMKD
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH
REKRTEITQDFVLKELYAIAKSNGSNYAEVVKKSYMKPVYDEQGNKIGEEEVFYKDVEIK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCCCCHHHEEECCCCC
ETKDLTTNEKKAITAIKNTKFGISVETADKVKALELLGRHLGMFKDKVEVNGSLCNEISI
CCCCCCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TIDGEEYGT
EECCCCCCC
>Mature Secondary Structure
MKLTPKQKIFCDEYLVDLNATRAYKAAYKNIKKDETAAVNGNRLLRNAKVKEYIDKRMKD
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH
REKRTEITQDFVLKELYAIAKSNGSNYAEVVKKSYMKPVYDEQGNKIGEEEVFYKDVEIK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCCCCHHHEEECCCCC
ETKDLTTNEKKAITAIKNTKFGISVETADKVKALELLGRHLGMFKDKVEVNGSLCNEISI
CCCCCCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TIDGEEYGT
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA