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The map label for this gene is yqaT [H]

Identifier: 226949723

GI number: 226949723

Start: 2679018

End: 2680256

Strand: Reverse

Name: yqaT [H]

Synonym: CLM_2663

Alternate gene names: 226949723

Gene position: 2680256-2679018 (Counterclockwise)

Preceding gene: 226949724

Following gene: 226949722

Centisome position: 64.5

GC content: 27.93

Gene sequence:

>1239_bases
ATGGGACTTAAGCTTGATATTAGCTCAAAAGTATTTAATGAAATATATTTAAAACATCAACTTAATAATAATAAACGTTA
TCAGATTTACTTTGGAGGTTCATCCTCAGGTAAATCTTTTTCTTTAGCTCAAAGAACTGTACTAGATGTACTTAATAGCC
ATAGAAATTATTTAATAGTAAGAAATGTTCAAAATACAATAAAGAGGTCATGTCTTAATGAAATAACAAAGGCAATAAGT
AATTTTAAAGTTGCTGATTATTTTGAAGTTAATAAAACAGATATGATAATTACTTGTAAGATAAATAAAAAGCAAATATT
ATTTTGTGGTTTAGATGATGTTGAAAAGATTAAATCTATAACCCCCATAGATGGAGTAATAACTGATATATGGGTAGAAG
AAGCTACAGAAACAGAATATAAAGCAGTTAAACAATTAGATAAAAGACTTAGAGGAAGGTCAGAGGTAACTAAAAGATTA
ACTTTAAGCTTTAACCCAATACTTAAGGACCATTGGTTATTTGAAGAGTATTTTAATATATGGGAAGATGATAAGCAGTA
TGTAGAAAAGAACAATGTATCTATTCTTAAAACTACGTATAAAGATAATAAATTTTTAACTGATGATGATATAGCAGCAT
TAGAAAATGAATCAGATCCTTATTACTATGAAGTATATACAAAAGGTAATTGGGGAGTTCTTGGAGCTGTTATATTTAAG
AATTGGAAAGTAAAAGATTTTAGTGATATTGAAAAAACTTTTGATAATTATAGGCATGGTGTTGACTGGGGTTTTGCCGA
TGATCCTTTTGCTTATATAAAATCACATTATGATAAAACAAGAAAAAGACTTTATATATGTGATGAAATAGAGGTAGTAG
GGATGTTGAATGAGGAATCAGCTCCTTTAGTAAAAGAAAAAGCAGGTTCAAGTAGAGTTACATGTGATAGTGCAGAACCT
AAGTCAGTGGCAGAATATAAAAAGTTAAGAGTAAATGCTAAATCAGCAAAGAAAGGACCAGGCAGCATTGAATATGGGAT
TAAATTTTTACAAGGATTAGAAATTATAATACATCCAAGATGTCAAAATTTTAGAAATGAAATAAGTAAATATAAATACA
AAGAAGATAAAAATGGCAATATATTACCTATGCCGGTGGATAAAGACAACCATTTAATAGATGCTCTTAGGTATAGTTTA
GAAAATGATATGAATGGTAATTCAATTTCATTTGACTAA

Upstream 100 bases:

>100_bases
TTAGAGCTTTTAGGTAGACACCTAGGAATGTTTAAGGATAAAGTAGAAGTTAATGGTAGTCTATGCAATGAAATCAGTAT
AACAATAGATGGTGAAGAGT

Downstream 100 bases:

>100_bases
GGAGGTGTTAAGATGTTTATGGTAGATAAAATATTAAGTAATGGAGCTAATTCAGTAATGAGCTTAGAAGAAATTATTCA
AGAAGAAATAAAAGAATGGA

Product: phage terminase large subunit, pbsx family

Products: NA

Alternate protein names: ORF50 [H]

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MGLKLDISSKVFNEIYLKHQLNNNKRYQIYFGGSSSGKSFSLAQRTVLDVLNSHRNYLIVRNVQNTIKRSCLNEITKAIS
NFKVADYFEVNKTDMIITCKINKKQILFCGLDDVEKIKSITPIDGVITDIWVEEATETEYKAVKQLDKRLRGRSEVTKRL
TLSFNPILKDHWLFEEYFNIWEDDKQYVEKNNVSILKTTYKDNKFLTDDDIAALENESDPYYYEVYTKGNWGVLGAVIFK
NWKVKDFSDIEKTFDNYRHGVDWGFADDPFAYIKSHYDKTRKRLYICDEIEVVGMLNEESAPLVKEKAGSSRVTCDSAEP
KSVAEYKKLRVNAKSAKKGPGSIEYGIKFLQGLEIIIHPRCQNFRNEISKYKYKEDKNGNILPMPVDKDNHLIDALRYSL
ENDMNGNSISFD

Sequences:

>Translated_412_residues
MGLKLDISSKVFNEIYLKHQLNNNKRYQIYFGGSSSGKSFSLAQRTVLDVLNSHRNYLIVRNVQNTIKRSCLNEITKAIS
NFKVADYFEVNKTDMIITCKINKKQILFCGLDDVEKIKSITPIDGVITDIWVEEATETEYKAVKQLDKRLRGRSEVTKRL
TLSFNPILKDHWLFEEYFNIWEDDKQYVEKNNVSILKTTYKDNKFLTDDDIAALENESDPYYYEVYTKGNWGVLGAVIFK
NWKVKDFSDIEKTFDNYRHGVDWGFADDPFAYIKSHYDKTRKRLYICDEIEVVGMLNEESAPLVKEKAGSSRVTCDSAEP
KSVAEYKKLRVNAKSAKKGPGSIEYGIKFLQGLEIIIHPRCQNFRNEISKYKYKEDKNGNILPMPVDKDNHLIDALRYSL
ENDMNGNSISFD
>Mature_411_residues
GLKLDISSKVFNEIYLKHQLNNNKRYQIYFGGSSSGKSFSLAQRTVLDVLNSHRNYLIVRNVQNTIKRSCLNEITKAISN
FKVADYFEVNKTDMIITCKINKKQILFCGLDDVEKIKSITPIDGVITDIWVEEATETEYKAVKQLDKRLRGRSEVTKRLT
LSFNPILKDHWLFEEYFNIWEDDKQYVEKNNVSILKTTYKDNKFLTDDDIAALENESDPYYYEVYTKGNWGVLGAVIFKN
WKVKDFSDIEKTFDNYRHGVDWGFADDPFAYIKSHYDKTRKRLYICDEIEVVGMLNEESAPLVKEKAGSSRVTCDSAEPK
SVAEYKKLRVNAKSAKKGPGSIEYGIKFLQGLEIIIHPRCQNFRNEISKYKYKEDKNGNILPMPVDKDNHLIDALRYSLE
NDMNGNSISFD

Specific function: May function as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 47790; Mature: 47659

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKLDISSKVFNEIYLKHQLNNNKRYQIYFGGSSSGKSFSLAQRTVLDVLNSHRNYLIV
CCEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
RNVQNTIKRSCLNEITKAISNFKVADYFEVNKTDMIITCKINKKQILFCGLDDVEKIKSI
ECHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCHHHHHCC
TPIDGVITDIWVEEATETEYKAVKQLDKRLRGRSEVTKRLTLSFNPILKDHWLFEEYFNI
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHEEEEEECCHHHHHHHHHHHHHH
WEDDKQYVEKNNVSILKTTYKDNKFLTDDDIAALENESDPYYYEVYTKGNWGVLGAVIFK
CCCHHHHHHCCCCEEEEEEECCCCEECCCCHHHHCCCCCCEEEEEEECCCCCEEEHHHHC
NWKVKDFSDIEKTFDNYRHGVDWGFADDPFAYIKSHYDKTRKRLYICDEIEVVGMLNEES
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCEEEEEEECCCC
APLVKEKAGSSRVTCDSAEPKSVAEYKKLRVNAKSAKKGPGSIEYGIKFLQGLEIIIHPR
CCCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCEEEECCC
CQNFRNEISKYKYKEDKNGNILPMPVDKDNHLIDALRYSLENDMNGNSISFD
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GLKLDISSKVFNEIYLKHQLNNNKRYQIYFGGSSSGKSFSLAQRTVLDVLNSHRNYLIV
CEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
RNVQNTIKRSCLNEITKAISNFKVADYFEVNKTDMIITCKINKKQILFCGLDDVEKIKSI
ECHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCHHHHHCC
TPIDGVITDIWVEEATETEYKAVKQLDKRLRGRSEVTKRLTLSFNPILKDHWLFEEYFNI
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHEEEEEECCHHHHHHHHHHHHHH
WEDDKQYVEKNNVSILKTTYKDNKFLTDDDIAALENESDPYYYEVYTKGNWGVLGAVIFK
CCCHHHHHHCCCCEEEEEEECCCCEECCCCHHHHCCCCCCEEEEEEECCCCCEEEHHHHC
NWKVKDFSDIEKTFDNYRHGVDWGFADDPFAYIKSHYDKTRKRLYICDEIEVVGMLNEES
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCEEEEEEECCCC
APLVKEKAGSSRVTCDSAEPKSVAEYKKLRVNAKSAKKGPGSIEYGIKFLQGLEIIIHPR
CCCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCEEEECCC
CQNFRNEISKYKYKEDKNGNILPMPVDKDNHLIDALRYSLENDMNGNSISFD
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]