| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949714
Identifier: 226949714
GI number: 226949714
Start: 2672300
End: 2672791
Strand: Reverse
Name: 226949714
Synonym: CLM_2654
Alternate gene names: NA
Gene position: 2672791-2672300 (Counterclockwise)
Preceding gene: 226949715
Following gene: 226949713
Centisome position: 64.32
GC content: 33.54
Gene sequence:
>492_bases ATGGCTAGATTAGCGAGTTTTGATTACTCTGATTTTAAGAAGATGGCCAAGAGTTTTCAAAAGGCACTTGATGAAAGGGT AATTGAAAGATGGATAAGAGAATTTTTATTGGAGATGGCATTTAGAGCTGAAAGAAAGATTAAAAAGAGAACTCCAGTAG GTGTTTATAGTAATCAAGTGTCCTTTACAACTAAGGATGGTAAAGAGGTAAGTTTTACAACTAGTAGCTCTAAAACAGGA GGGCATTTAAGACGTAACTGGCAAGTGGGAAATGTAGTAAAGCAAGGTGATTCTTATGCAGTGGAGATATTTAATAATGT GGATTATGCTTCTTATGTCGAGTATGGGCATAGAACTAAAAATCATAAAGGCTGGGTTGAAGGTAGATTTATGGCTACAA TATCAATGCAAGAAATTGAAAGGCAGTTATCTAAGTTTTTAGAAAGAAAACAAGTAGAATTATTAAATCAAATACTTAAT GGTAGGTTGTAA
Upstream 100 bases:
>100_bases TTACTAACCAATTTGGGATTATAACTAAATATAAAGCTGGAGAAGGATTTCCTTATTATACACACCAGGAAGTTATTTTA AATAAAGAGGATAAAGCTTA
Downstream 100 bases:
>100_bases AATGACAAATATAAATGATTTAAGGATAGGAATTAACCAAACATTGGATAAAAAATTTCCTAACATAAATATATATGGTG AAGAGATTGAACAAGGTTTT
Product: phage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MARLASFDYSDFKKMAKSFQKALDERVIERWIREFLLEMAFRAERKIKKRTPVGVYSNQVSFTTKDGKEVSFTTSSSKTG GHLRRNWQVGNVVKQGDSYAVEIFNNVDYASYVEYGHRTKNHKGWVEGRFMATISMQEIERQLSKFLERKQVELLNQILN GRL
Sequences:
>Translated_163_residues MARLASFDYSDFKKMAKSFQKALDERVIERWIREFLLEMAFRAERKIKKRTPVGVYSNQVSFTTKDGKEVSFTTSSSKTG GHLRRNWQVGNVVKQGDSYAVEIFNNVDYASYVEYGHRTKNHKGWVEGRFMATISMQEIERQLSKFLERKQVELLNQILN GRL >Mature_162_residues ARLASFDYSDFKKMAKSFQKALDERVIERWIREFLLEMAFRAERKIKKRTPVGVYSNQVSFTTKDGKEVSFTTSSSKTGG HLRRNWQVGNVVKQGDSYAVEIFNNVDYASYVEYGHRTKNHKGWVEGRFMATISMQEIERQLSKFLERKQVELLNQILNG RL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19085; Mature: 18954
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLASFDYSDFKKMAKSFQKALDERVIERWIREFLLEMAFRAERKIKKRTPVGVYSNQV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCE SFTTKDGKEVSFTTSSSKTGGHLRRNWQVGNVVKQGDSYAVEIFNNVDYASYVEYGHRTK EEEECCCCEEEEECCCCCCCCHHHCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCC NHKGWVEGRFMATISMQEIERQLSKFLERKQVELLNQILNGRL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ARLASFDYSDFKKMAKSFQKALDERVIERWIREFLLEMAFRAERKIKKRTPVGVYSNQV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCE SFTTKDGKEVSFTTSSSKTGGHLRRNWQVGNVVKQGDSYAVEIFNNVDYASYVEYGHRTK EEEECCCCEEEEECCCCCCCCHHHCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCC NHKGWVEGRFMATISMQEIERQLSKFLERKQVELLNQILNGRL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA