Click here to switch to the map view.

The map label for this gene is 226949713

Identifier: 226949713

GI number: 226949713

Start: 2671867

End: 2672298

Strand: Reverse

Name: 226949713

Synonym: CLM_2653

Alternate gene names: NA

Gene position: 2672298-2671867 (Counterclockwise)

Preceding gene: 226949714

Following gene: 226949712

Centisome position: 64.31

GC content: 26.62

Gene sequence:

>432_bases
ATGACAAATATAAATGATTTAAGGATAGGAATTAACCAAACATTGGATAAAAAATTTCCTAACATAAATATATATGGTGA
AGAGATTGAACAAGGTTTTGAAGAACCTTGTTTTTTTGTTAAGGTTTTAAGTTCAGGTCAAGATAAAGAGATCAACGTTA
GGTATAAGAAAAATATATCATTCAACATTCATTATTTTAGTGATAAAGAGGATTTGAATGATGATTGCAATGATATGGCT
GATAAGCTTTATGAGGTGCTTGAATATGTAAAAGTAAATAATAGTTTATATAGATCTAATGAAATGACACATGAGGTTAT
AGATGGAGTTTTACACTTCATGTTGAAATTTAATTATCATGTGCTTAAGGAAATTGAAAAAGCTCCTAAAATGAATAAAT
TGAAACAGGAGGTATATTTAAATGGTAGATAA

Upstream 100 bases:

>100_bases
GCTACAATATCAATGCAAGAAATTGAAAGGCAGTTATCTAAGTTTTTAGAAAGAAAACAAGTAGAATTATTAAATCAAAT
ACTTAATGGTAGGTTGTAAA

Downstream 100 bases:

>100_bases
AGAACAAGAAATTAAATTTACCAAAGAACAAATAGTAAATTCAAAACAGTTTACAGTAATAGAAATAGATGTACTTAAAG
CTTTATTAAAAGATGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTNINDLRIGINQTLDKKFPNINIYGEEIEQGFEEPCFFVKVLSSGQDKEINVRYKKNISFNIHYFSDKEDLNDDCNDMA
DKLYEVLEYVKVNNSLYRSNEMTHEVIDGVLHFMLKFNYHVLKEIEKAPKMNKLKQEVYLNGR

Sequences:

>Translated_143_residues
MTNINDLRIGINQTLDKKFPNINIYGEEIEQGFEEPCFFVKVLSSGQDKEINVRYKKNISFNIHYFSDKEDLNDDCNDMA
DKLYEVLEYVKVNNSLYRSNEMTHEVIDGVLHFMLKFNYHVLKEIEKAPKMNKLKQEVYLNGR
>Mature_142_residues
TNINDLRIGINQTLDKKFPNINIYGEEIEQGFEEPCFFVKVLSSGQDKEINVRYKKNISFNIHYFSDKEDLNDDCNDMAD
KLYEVLEYVKVNNSLYRSNEMTHEVIDGVLHFMLKFNYHVLKEIEKAPKMNKLKQEVYLNGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16952; Mature: 16820

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNINDLRIGINQTLDKKFPNINIYGEEIEQGFEEPCFFVKVLSSGQDKEINVRYKKNIS
CCCCCCEEECCCHHHHHCCCCCEEEHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCE
FNIHYFSDKEDLNDDCNDMADKLYEVLEYVKVNNSLYRSNEMTHEVIDGVLHFMLKFNYH
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHH
VLKEIEKAPKMNKLKQEVYLNGR
HHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TNINDLRIGINQTLDKKFPNINIYGEEIEQGFEEPCFFVKVLSSGQDKEINVRYKKNIS
CCCCCEEECCCHHHHHCCCCCEEEHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCE
FNIHYFSDKEDLNDDCNDMADKLYEVLEYVKVNNSLYRSNEMTHEVIDGVLHFMLKFNYH
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHH
VLKEIEKAPKMNKLKQEVYLNGR
HHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA