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The map label for this gene is yqbT [H]

Identifier: 226949701

GI number: 226949701

Start: 2662909

End: 2664003

Strand: Reverse

Name: yqbT [H]

Synonym: CLM_2641

Alternate gene names: 226949701

Gene position: 2664003-2662909 (Counterclockwise)

Preceding gene: 226949702

Following gene: 226949700

Centisome position: 64.11

GC content: 29.68

Gene sequence:

>1095_bases
TTGTTTGAAGATCAAACCGAAGAAGTGATTTTAGATAGAATGATGAATAAAATATCTAATGATTTAGACAAAAGAGAAGG
TTCTATAATTTATAATGCTTTAGCACCAGCAGCCCAAGAAGTCGCAAAAATGTATTCAGATATGGATTATTTTTTAAAAT
GTACTTTTGCAAGCCCTGATATGCCACCTGAACTTTTAGATTTAAGGGTAGCAGAAGAAGGCCTTAAAAGAGAAAAAGCA
ACAAACTCTATAAAGAAAGGCTATTTTTACAATGAAGAAAATGAATTAATAGATATTCCTTTGAATAGTAGATTTTCTAT
AGAAGATTTTAATTTTATTGCTGTAGAAAAAATTTCTACTGGTTTATATAAAATGCAATGTGAAACAATCGGCATAGAGG
GTAACCATATAACAGGATCATTAATACCAATTGAATATATTGAAGATTTATCTATAGCTACATTAGGAGAGCTCATTATA
CCAGGAGAAGATGTTGAAAGTAACCAGAGTTTATATGATAGATATATAGAGCATCTTAATGAGAAACCTTATGGTGGTAA
TATAGCAGATTATAAAATTAATACTAGAGCTATTGAAGGTGTTGGAATCGTAAAAGCATTTCCTATATGGAATGGTGGTG
GAACTGTAAAAATAGTATTTTTAGATAGTGATTACAGTGTCCCTACAAAAGAATTAATAGATAAGGTGCAAACTATTTTA
GATCCTGTACAAAACCAAGGTAAAGGATTTGGTATTGCTCCAGTTGGGCATATGGTTACTGTGTTAGGTGCTAAAGATAT
AGAAATAACTATAGAAACAAAACTTCTTTTAAAGAGAGGACTTACTATTGGTCAAGTTCAAGAAGATATAGAAAAAGTTA
TTAAAGATTATCTGTTAAACCTTAGAAAACAATGGCATGAAGATGATAATACAATAGCTAGAATAAGTCAGATTGAAGCT
AGAATTTTGAATGTAGAAGGTGTAGCAGATTTATTTAATACTAAGATAAATGGTAAAGAGGAAAATTTAACTTTAGAAAG
TGAAGAAGTTCCAATATTGAAAGAGGTGGTATTGAGTGAAAAAGAAATTAATTGA

Upstream 100 bases:

>100_bases
TGTTGATAATTTTATATTTAATTATGATAAAGACGGTGTAGAAGTAAGTTTTACCGTCTTTTCTATTTATGGAGAATTTA
CTGAAAGTGTGGTGAGATAG

Downstream 100 bases:

>100_bases
TTTTTTACCACCACAAATATCTGATATAGAAGAATTTAAAAATATAATGGCTACTGAAAATATAGAGTTAGAATTAATTG
AAAAAGGCCAGGAAAGAATT

Product: putative baseplate J-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MFEDQTEEVILDRMMNKISNDLDKREGSIIYNALAPAAQEVAKMYSDMDYFLKCTFASPDMPPELLDLRVAEEGLKREKA
TNSIKKGYFYNEENELIDIPLNSRFSIEDFNFIAVEKISTGLYKMQCETIGIEGNHITGSLIPIEYIEDLSIATLGELII
PGEDVESNQSLYDRYIEHLNEKPYGGNIADYKINTRAIEGVGIVKAFPIWNGGGTVKIVFLDSDYSVPTKELIDKVQTIL
DPVQNQGKGFGIAPVGHMVTVLGAKDIEITIETKLLLKRGLTIGQVQEDIEKVIKDYLLNLRKQWHEDDNTIARISQIEA
RILNVEGVADLFNTKINGKEENLTLESEEVPILKEVVLSEKEIN

Sequences:

>Translated_364_residues
MFEDQTEEVILDRMMNKISNDLDKREGSIIYNALAPAAQEVAKMYSDMDYFLKCTFASPDMPPELLDLRVAEEGLKREKA
TNSIKKGYFYNEENELIDIPLNSRFSIEDFNFIAVEKISTGLYKMQCETIGIEGNHITGSLIPIEYIEDLSIATLGELII
PGEDVESNQSLYDRYIEHLNEKPYGGNIADYKINTRAIEGVGIVKAFPIWNGGGTVKIVFLDSDYSVPTKELIDKVQTIL
DPVQNQGKGFGIAPVGHMVTVLGAKDIEITIETKLLLKRGLTIGQVQEDIEKVIKDYLLNLRKQWHEDDNTIARISQIEA
RILNVEGVADLFNTKINGKEENLTLESEEVPILKEVVLSEKEIN
>Mature_364_residues
MFEDQTEEVILDRMMNKISNDLDKREGSIIYNALAPAAQEVAKMYSDMDYFLKCTFASPDMPPELLDLRVAEEGLKREKA
TNSIKKGYFYNEENELIDIPLNSRFSIEDFNFIAVEKISTGLYKMQCETIGIEGNHITGSLIPIEYIEDLSIATLGELII
PGEDVESNQSLYDRYIEHLNEKPYGGNIADYKINTRAIEGVGIVKAFPIWNGGGTVKIVFLDSDYSVPTKELIDKVQTIL
DPVQNQGKGFGIAPVGHMVTVLGAKDIEITIETKLLLKRGLTIGQVQEDIEKVIKDYLLNLRKQWHEDDNTIARISQIEA
RILNVEGVADLFNTKINGKEENLTLESEEVPILKEVVLSEKEIN

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 41010; Mature: 41010

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEDQTEEVILDRMMNKISNDLDKREGSIIYNALAPAAQEVAKMYSDMDYFLKCTFASPD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCC
MPPELLDLRVAEEGLKREKATNSIKKGYFYNEENELIDIPLNSRFSIEDFNFIAVEKIST
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCEECCCCCCEEEEEHHCC
GLYKMQCETIGIEGNHITGSLIPIEYIEDLSIATLGELIIPGEDVESNQSLYDRYIEHLN
CEEEEEEEEECCCCCEEECCEEEHHHHHCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHC
EKPYGGNIADYKINTRAIEGVGIVKAFPIWNGGGTVKIVFLDSDYSVPTKELIDKVQTIL
CCCCCCCEEEEEEECEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHH
DPVQNQGKGFGIAPVGHMVTVLGAKDIEITIETKLLLKRGLTIGQVQEDIEKVIKDYLLN
HHHHHCCCCCCCCCHHHHHHEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LRKQWHEDDNTIARISQIEARILNVEGVADLFNTKINGKEENLTLESEEVPILKEVVLSE
HHHHHCCCCCHHHHHHHHHHHEECHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHH
KEIN
CCCC
>Mature Secondary Structure
MFEDQTEEVILDRMMNKISNDLDKREGSIIYNALAPAAQEVAKMYSDMDYFLKCTFASPD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCC
MPPELLDLRVAEEGLKREKATNSIKKGYFYNEENELIDIPLNSRFSIEDFNFIAVEKIST
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCEECCCCCCEEEEEHHCC
GLYKMQCETIGIEGNHITGSLIPIEYIEDLSIATLGELIIPGEDVESNQSLYDRYIEHLN
CEEEEEEEEECCCCCEEECCEEEHHHHHCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHC
EKPYGGNIADYKINTRAIEGVGIVKAFPIWNGGGTVKIVFLDSDYSVPTKELIDKVQTIL
CCCCCCCEEEEEEECEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHH
DPVQNQGKGFGIAPVGHMVTVLGAKDIEITIETKLLLKRGLTIGQVQEDIEKVIKDYLLN
HHHHHCCCCCCCCCHHHHHHEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LRKQWHEDDNTIARISQIEARILNVEGVADLFNTKINGKEENLTLESEEVPILKEVVLSE
HHHHHCCCCCHHHHHHHHHHHEECHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHH
KEIN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]