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The map label for this gene is 226949679

Identifier: 226949679

GI number: 226949679

Start: 2647523

End: 2647837

Strand: Reverse

Name: 226949679

Synonym: CLM_2619

Alternate gene names: NA

Gene position: 2647837-2647523 (Counterclockwise)

Preceding gene: 226949680

Following gene: 226949678

Centisome position: 63.72

GC content: 24.76

Gene sequence:

>315_bases
TTGTTTCATAGTTCAATTGGTATGTTTATAGGAAAAATTCCAGTATCTGAATCTTTGGAAGAAGCTTTTGAGGATATTTT
AAAAAATCCTTACATTATGTTTATTTCATTTATAATAGTAGCACCTATTTTTGAAGAAATACTTATGAGAGGTATTATTC
TAGAAGGCTTTTTAAACAACTATAAACCAGCAACTGCTATAATTATTTCATCTATTATGTTTGGAGCAATGCACTTAAAT
ATTTTTCAATTTTTTAATGCTACAATTATAGGATTATTTTTGGGAGTTATATATATTATAAAACAAGATCTTTAG

Upstream 100 bases:

>100_bases
GTTAATTAATACTTACTTCTAGTGATAAAATAATAGGTCCTTAGAATTATAATATGAAAGTATTTAATGTACAATCTTTT
TAATGTTAGGATTCTTTTTT

Downstream 100 bases:

>100_bases
TATTAAGTATAGTTGCTCATATGGTAAATAATGCAATACCTATCTTAGGCATTCAGCGTAATATTATAAGTTTTTTCATA
GGTGTAGTAATTTTTATAAT

Product: caax amino protease family protein

Products: NA

Alternate protein names: Abortive Infection Protein; Caax Amino Protease Family Protein; Membrane-Associated Protease

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MFHSSIGMFIGKIPVSESLEEAFEDILKNPYIMFISFIIVAPIFEEILMRGIILEGFLNNYKPATAIIISSIMFGAMHLN
IFQFFNATIIGLFLGVIYIIKQDL

Sequences:

>Translated_104_residues
MFHSSIGMFIGKIPVSESLEEAFEDILKNPYIMFISFIIVAPIFEEILMRGIILEGFLNNYKPATAIIISSIMFGAMHLN
IFQFFNATIIGLFLGVIYIIKQDL
>Mature_104_residues
MFHSSIGMFIGKIPVSESLEEAFEDILKNPYIMFISFIIVAPIFEEILMRGIILEGFLNNYKPATAIIISSIMFGAMHLN
IFQFFNATIIGLFLGVIYIIKQDL

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11796; Mature: 11796

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHSSIGMFIGKIPVSESLEEAFEDILKNPYIMFISFIIVAPIFEEILMRGIILEGFLNN
CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YKPATAIIISSIMFGAMHLNIFQFFNATIIGLFLGVIYIIKQDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFHSSIGMFIGKIPVSESLEEAFEDILKNPYIMFISFIIVAPIFEEILMRGIILEGFLNN
CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YKPATAIIISSIMFGAMHLNIFQFFNATIIGLFLGVIYIIKQDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA