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The map label for this gene is dnaC [H]

Identifier: 226949625

GI number: 226949625

Start: 2603302

End: 2604105

Strand: Reverse

Name: dnaC [H]

Synonym: CLM_2562

Alternate gene names: 226949625

Gene position: 2604105-2603302 (Counterclockwise)

Preceding gene: 226949626

Following gene: 226949624

Centisome position: 62.67

GC content: 29.1

Gene sequence:

>804_bases
ATGAACAGCAAAGACTTACAGCCGAAGGTATCGGAATATAAAATAAAAACTTGTGGTAATTGTGGGGAACCAATAGAAAA
AATAATTAATTTACTAGGTACAGAAAGAATTGTTCCCATAATGTGTTCATGTAAAAAGGCAAAGCATGAGGCCAAAAGAA
TTGAAGAAGAAAACAAAAATAGACAATTGAGAGTTAAAAGCATAATTAAAAATTCATTAATGGATGAAAAGTTTAAGAGC
AGTAGATTTGATAACTGGGACTTTAGTAAAGGCACTAAGAAAATGTACAATATAGGCTTTAAGTATGCATCAAAATTTTC
TGAAATGAAAAAAGAATCAATAGGACTATTAATTCACGGTGATCCTGGCAATGGTAAAACTCATACAACAGCATGTATAG
CAAATGAACTAATAGATAAAATGATTCCTGTTATATGTGTAAATATAGATGGTTTACTAAATAGAATCAAAGAAACATAT
AACACATGGGGCAAAGAAGGAGAAGAAACTATATTAAAAAGTTTGAGCAATGCAGATTTATTGATTATAGATGATTTAGG
AACAGAGCAGGATACAGATTGGGCCAAAACTAAAATATACAACATCTTGGATAGCAGGTACAGAAATGGATTACCAATTA
TAGTTACTACAAATATTTCTTTAGTAGAACTTAAAGAAAAATATCATAAAAGAACTTATGATAGGTTATTAGAAATGTGT
ACACCAGTATTTAATGATGGAAAGAGCATAAGAGTAGAAAAGGCTAAAGAGAAAACACAAATATTAAAAGAATTATTAAG
TTAA

Upstream 100 bases:

>100_bases
TTTAACTATTGTAAACCAGTAATATTAAAAATTTGGAATAATATAAACATCAAAAAGAAAGGAGCAAAATCACAAAATGG
AAACAATAGCTCAGGTACTG

Downstream 100 bases:

>100_bases
AGAATGGGGGATAAAAATGGGAATATGGATTAGAAGTAAAGGGAAAGATGTTTTAGTAAATTGCAAAAATATAGAGGTTG
ATGGATTAAGTGTGTATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNSKDLQPKVSEYKIKTCGNCGEPIEKIINLLGTERIVPIMCSCKKAKHEAKRIEEENKNRQLRVKSIIKNSLMDEKFKS
SRFDNWDFSKGTKKMYNIGFKYASKFSEMKKESIGLLIHGDPGNGKTHTTACIANELIDKMIPVICVNIDGLLNRIKETY
NTWGKEGEETILKSLSNADLLIIDDLGTEQDTDWAKTKIYNILDSRYRNGLPIIVTTNISLVELKEKYHKRTYDRLLEMC
TPVFNDGKSIRVEKAKEKTQILKELLS

Sequences:

>Translated_267_residues
MNSKDLQPKVSEYKIKTCGNCGEPIEKIINLLGTERIVPIMCSCKKAKHEAKRIEEENKNRQLRVKSIIKNSLMDEKFKS
SRFDNWDFSKGTKKMYNIGFKYASKFSEMKKESIGLLIHGDPGNGKTHTTACIANELIDKMIPVICVNIDGLLNRIKETY
NTWGKEGEETILKSLSNADLLIIDDLGTEQDTDWAKTKIYNILDSRYRNGLPIIVTTNISLVELKEKYHKRTYDRLLEMC
TPVFNDGKSIRVEKAKEKTQILKELLS
>Mature_267_residues
MNSKDLQPKVSEYKIKTCGNCGEPIEKIINLLGTERIVPIMCSCKKAKHEAKRIEEENKNRQLRVKSIIKNSLMDEKFKS
SRFDNWDFSKGTKKMYNIGFKYASKFSEMKKESIGLLIHGDPGNGKTHTTACIANELIDKMIPVICVNIDGLLNRIKETY
NTWGKEGEETILKSLSNADLLIIDDLGTEQDTDWAKTKIYNILDSRYRNGLPIIVTTNISLVELKEKYHKRTYDRLLEMC
TPVFNDGKSIRVEKAKEKTQILKELLS

Specific function: This protein is required for chromosomal replication. It forms, in concert with dnaB protein and other prepriming proteins dnaT, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N' [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaC family [H]

Homologues:

Organism=Escherichia coli, GI1790823, Length=181, Percent_Identity=26.5193370165746, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787623, Length=225, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 30629; Mature: 30629

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKDLQPKVSEYKIKTCGNCGEPIEKIINLLGTERIVPIMCSCKKAKHEAKRIEEENKN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RQLRVKSIIKNSLMDEKFKSSRFDNWDFSKGTKKMYNIGFKYASKFSEMKKESIGLLIHG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
DPGNGKTHTTACIANELIDKMIPVICVNIDGLLNRIKETYNTWGKEGEETILKSLSNADL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCE
LIIDDLGTEQDTDWAKTKIYNILDSRYRNGLPIIVTTNISLVELKEKYHKRTYDRLLEMC
EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
TPVFNDGKSIRVEKAKEKTQILKELLS
HHHHCCCCCEEHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNSKDLQPKVSEYKIKTCGNCGEPIEKIINLLGTERIVPIMCSCKKAKHEAKRIEEENKN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RQLRVKSIIKNSLMDEKFKSSRFDNWDFSKGTKKMYNIGFKYASKFSEMKKESIGLLIHG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
DPGNGKTHTTACIANELIDKMIPVICVNIDGLLNRIKETYNTWGKEGEETILKSLSNADL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCE
LIIDDLGTEQDTDWAKTKIYNILDSRYRNGLPIIVTTNISLVELKEKYHKRTYDRLLEMC
EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
TPVFNDGKSIRVEKAKEKTQILKELLS
HHHHCCCCCEEHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]