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The map label for this gene is 226949596

Identifier: 226949596

GI number: 226949596

Start: 2590597

End: 2591832

Strand: Reverse

Name: 226949596

Synonym: CLM_2533

Alternate gene names: NA

Gene position: 2591832-2590597 (Counterclockwise)

Preceding gene: 226949597

Following gene: 226949595

Centisome position: 62.37

GC content: 27.43

Gene sequence:

>1236_bases
ATGAGAAAGAAATTTAGTTTATTTGTAGTTTTTATATTTACCCTAGTAGTAGGGATTGTAGGCATTAGCAATGCAAAGGT
TAAAGCAGCAGGAGATAATACAAATGCTGTAGTAAATGAAAAAAAAGAATTCATACCTATACATAAATATACATTTGATA
ATGATGATGGTAATAATGTCATAGATACAGGTAATTCAAAAATATTGTTAAATGGCAATGCAAAAGGTTCTTTGCTTCTA
GATGAGGGTGGAAATAAATTTAGAAGATTTGATGGTAAAAGTAAAATTAGCTTTAACTCAAAAATTATTGATGGCAAAAG
TAAATTTACTTTAAAAATAAGGATTAGGCTTAATGAAGACAATTGTTCTTCTGATCATGGTTTTTATGTTATTGACAATT
CCAATACATATGATAGAGGAATATCAATTTTTTTAGGAGATAATAATATTGGTTTTAGGGTTAATGATTTCCGCTCATCT
GCAGGTATAAATATAAAAGATAATAAGTGGCATGATGTTATGCTAACATGGGATGGTACAACAAATAATAATGGAGTGAA
ATTTTATTTAGATAATTTAAAAAAACCAGTAAAATCTGGTAAAGTATCAACTATTAATGGAGCAATTGAAAATTTAGCTT
TTGGTGATATAGGATCATGGGATAGTGATAGATATAAATTTAAGGGAGATTTAGATGATATTGAAATATATGATGAAGTT
GTTGATTATTCAAGTAAAGCGGAGTCTATATCATTAGATAAAACATCTATGGATTTAATAGAAGGTAGTTCAGATAATCT
AAATGCTAAAGTATTACCTGAAGATGCTACTAATAAGAAAGTAGTATGGTCATCAAGTGATGAAAAGATAGCTAAGGTAG
ATGAAAATGGAAAAGTAACAGCTATAAAAGAAGGACAAGTAACAATAACAGCTAAAGTAGAAGGTACTGATTTAACAGCT
ACTTGTAAAGTTAATGTTACTAAAAAGGTAGAAGAAAATAAAAATAATGCTATATTAAGCATATCTTTAGTAAATGGAGC
TACAAAAGAATATGATGTAAGTATGCAAGAAGTAGAAAAGTTTATAAATTGGTTTGAGGAAAGATCTAATGGCAAAGGTC
CATCATTATATTCATTTGATAAAAAGATTAATCCTTATAAAACAGTTAAAGAATATATAGTACATGATAAGATAGCATCT
TTTGAAGTAAGAGAGTATGAAGGAACAAATAAATAG

Upstream 100 bases:

>100_bases
AACTCATAAAATGTAACAAAAAGCAATAATTTAATACTTGAATTTACAAATTTACAAATTATATAATGAATATGTATAAA
ATTATAAGGAGGAAAAAAAT

Downstream 100 bases:

>100_bases
TTAAATATTAGAGAGCACTTAAGGAATAAGCCTTAGGTGCTTTTTACATACCTAAAATTGATTAGGAGACTATATTCATA
TTAAATAAAATATGGGAGGT

Product: Ig group 2 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MRKKFSLFVVFIFTLVVGIVGISNAKVKAAGDNTNAVVNEKKEFIPIHKYTFDNDDGNNVIDTGNSKILLNGNAKGSLLL
DEGGNKFRRFDGKSKISFNSKIIDGKSKFTLKIRIRLNEDNCSSDHGFYVIDNSNTYDRGISIFLGDNNIGFRVNDFRSS
AGINIKDNKWHDVMLTWDGTTNNNGVKFYLDNLKKPVKSGKVSTINGAIENLAFGDIGSWDSDRYKFKGDLDDIEIYDEV
VDYSSKAESISLDKTSMDLIEGSSDNLNAKVLPEDATNKKVVWSSSDEKIAKVDENGKVTAIKEGQVTITAKVEGTDLTA
TCKVNVTKKVEENKNNAILSISLVNGATKEYDVSMQEVEKFINWFEERSNGKGPSLYSFDKKINPYKTVKEYIVHDKIAS
FEVREYEGTNK

Sequences:

>Translated_411_residues
MRKKFSLFVVFIFTLVVGIVGISNAKVKAAGDNTNAVVNEKKEFIPIHKYTFDNDDGNNVIDTGNSKILLNGNAKGSLLL
DEGGNKFRRFDGKSKISFNSKIIDGKSKFTLKIRIRLNEDNCSSDHGFYVIDNSNTYDRGISIFLGDNNIGFRVNDFRSS
AGINIKDNKWHDVMLTWDGTTNNNGVKFYLDNLKKPVKSGKVSTINGAIENLAFGDIGSWDSDRYKFKGDLDDIEIYDEV
VDYSSKAESISLDKTSMDLIEGSSDNLNAKVLPEDATNKKVVWSSSDEKIAKVDENGKVTAIKEGQVTITAKVEGTDLTA
TCKVNVTKKVEENKNNAILSISLVNGATKEYDVSMQEVEKFINWFEERSNGKGPSLYSFDKKINPYKTVKEYIVHDKIAS
FEVREYEGTNK
>Mature_411_residues
MRKKFSLFVVFIFTLVVGIVGISNAKVKAAGDNTNAVVNEKKEFIPIHKYTFDNDDGNNVIDTGNSKILLNGNAKGSLLL
DEGGNKFRRFDGKSKISFNSKIIDGKSKFTLKIRIRLNEDNCSSDHGFYVIDNSNTYDRGISIFLGDNNIGFRVNDFRSS
AGINIKDNKWHDVMLTWDGTTNNNGVKFYLDNLKKPVKSGKVSTINGAIENLAFGDIGSWDSDRYKFKGDLDDIEIYDEV
VDYSSKAESISLDKTSMDLIEGSSDNLNAKVLPEDATNKKVVWSSSDEKIAKVDENGKVTAIKEGQVTITAKVEGTDLTA
TCKVNVTKKVEENKNNAILSISLVNGATKEYDVSMQEVEKFINWFEERSNGKGPSLYSFDKKINPYKTVKEYIVHDKIAS
FEVREYEGTNK

Specific function: Unknown

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR008985
- InterPro:   IPR008964 [H]

Pfam domain/function: PF02368 Big_2 [H]

EC number: NA

Molecular weight: Translated: 45867; Mature: 45867

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKFSLFVVFIFTLVVGIVGISNAKVKAAGDNTNAVVNEKKEFIPIHKYTFDNDDGNNV
CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHEEEEEEEECCCCCCCCE
IDTGNSKILLNGNAKGSLLLDEGGNKFRRFDGKSKISFNSKIIDGKSKFTLKIRIRLNED
EECCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEECCEEECCCCEEEEEEEEEECCC
NCSSDHGFYVIDNSNTYDRGISIFLGDNNIGFRVNDFRSSAGINIKDNKWHDVMLTWDGT
CCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCEECCCCEEEEEEEECCC
TNNNGVKFYLDNLKKPVKSGKVSTINGAIENLAFGDIGSWDSDRYKFKGDLDDIEIYDEV
CCCCCEEEEEHHHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHH
VDYSSKAESISLDKTSMDLIEGSSDNLNAKVLPEDATNKKVVWSSSDEKIAKVDENGKVT
HCCCCCCCEEEECCCHHHHHCCCCCCCCEEECCCCCCCCEEEECCCCCEEEEECCCCCEE
AIKEGQVTITAKVEGTDLTATCKVNVTKKVEENKNNAILSISLVNGATKEYDVSMQEVEK
EEECCEEEEEEEECCCCEEEEEEEEEEEHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHH
FINWFEERSNGKGPSLYSFDKKINPYKTVKEYIVHDKIASFEVREYEGTNK
HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRKKFSLFVVFIFTLVVGIVGISNAKVKAAGDNTNAVVNEKKEFIPIHKYTFDNDDGNNV
CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHEEEEEEEECCCCCCCCE
IDTGNSKILLNGNAKGSLLLDEGGNKFRRFDGKSKISFNSKIIDGKSKFTLKIRIRLNED
EECCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEECCEEECCCCEEEEEEEEEECCC
NCSSDHGFYVIDNSNTYDRGISIFLGDNNIGFRVNDFRSSAGINIKDNKWHDVMLTWDGT
CCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCEECCCCEEEEEEEECCC
TNNNGVKFYLDNLKKPVKSGKVSTINGAIENLAFGDIGSWDSDRYKFKGDLDDIEIYDEV
CCCCCEEEEEHHHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHH
VDYSSKAESISLDKTSMDLIEGSSDNLNAKVLPEDATNKKVVWSSSDEKIAKVDENGKVT
HCCCCCCCEEEECCCHHHHHCCCCCCCCEEECCCCCCCCEEEECCCCCEEEEECCCCCEE
AIKEGQVTITAKVEGTDLTATCKVNVTKKVEENKNNAILSISLVNGATKEYDVSMQEVEK
EEECCEEEEEEEECCCCEEEEEEEEEEEHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHH
FINWFEERSNGKGPSLYSFDKKINPYKTVKEYIVHDKIASFEVREYEGTNK
HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286; 1916274 [H]