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The map label for this gene is 226949567

Identifier: 226949567

GI number: 226949567

Start: 2568488

End: 2569654

Strand: Reverse

Name: 226949567

Synonym: CLM_2504

Alternate gene names: NA

Gene position: 2569654-2568488 (Counterclockwise)

Preceding gene: 226949568

Following gene: 226949566

Centisome position: 61.84

GC content: 30.08

Gene sequence:

>1167_bases
TTGGCAGAAAAATTCTATACTTTACTTACAGAAATAGGCAAAGCTAAAATAGCTAATAGTGCTGGATTTGGAAGTAAAAT
TAACTTTGTAAAAATGAAAGTTGGGGATGGTGGAGGATCTTATTACAATCCAAGAGAAGATCAAGAAGATTTAATCAATA
CAGTATGGGAAGGTAATATAACTCATGTGGCTATAGATGAGAAAAATCCTAATTGGATAAACGTAGAGATGATGATTCCT
GCAAATGTTGGCGGCTTTATGATTAGGGAATATGGGGTATTTGATGAAGATAATAATATGTTAGCTATAGCTAAATGTGC
AGAAAGCTATAAACCACTTGCTGAAGATGGCAGTACAAAAGAGCTAATAATGAAAATGGTATTAACAGTTTCTAATACAG
AAAATATAACTCTTAAGATAGATCCAACTATAATTTTTGCTAAAAAGTCTGAAATTGAAATACTTGAAAATAAAATAAAA
AATATTAAAATCCCAGTAACTTCTGTAAATAGTAAAACTGGTGCAATAGAATTAAAAGCATCAGATATAAAAACAGAAGA
TGGAAAGACAATTGAGTCACAATTGGATGATATTACGACAGATAATAAAAGATTAACTAAAGACAAAACAATCACAGGAG
CTATAAATGAGCTTTTTACCTCTGCCAATAATGGTAAAAAATTAATATCTGATGTTGTGGGAAATCCATTATTGGCTACT
GACACGTTTCAACAACAACATGATAAGATACAAATATTAAAAAATACTTTTGTAACTAATTTAAGCAAAAAAGAACAAGG
TGCATCAAGCACAGAAAATTTGCAAGACTTGATTAATAAAATTAATAATATCAATGTTGGTAAAAAATGGGCTGAAGGAA
CAGGAAAGGCTAGAGAAAGTTCTAATAAAGAAGTTTGTATGTCTGTTACTGATTTAGATTTTAGCCCAAAAACAGTTATT
ATTAATACTAGAAGTGATACCTATAGAGAACCCTATATCGCAATTGATTGTACACTATTTAAATACAAAACACAAGGCTG
GTATAGTGGGGGGTATATAATACTGGATGACGGATATGTACACAAAAATAATAGAGGTTTTGACTTTTATGCCAGTAATG
GTCATATAAGCAAAGATACTACATTTCAATGGATAGCTTTTGAATAA

Upstream 100 bases:

>100_bases
GGACACCAAACAATATTGAAACAACTGGAAACATAGAAATAGCATTAGCACAGAATGCAGGATTAGAGACTATAACAACA
TATCCAAAGGAGGGATAAAC

Downstream 100 bases:

>100_bases
GAGAGGTGAATAGCTGTGAAAAGAGGTAGTTTAATTATCTATGATAATACGGGTAAAATCTGGATAAACACTGGGGATGC
TGAAGGGGATGTACTCCCTC

Product: tail fiber protein

Products: NA

Alternate protein names: Phage Tail Fiber Protein; Tail Collar Domain Protein; Phage-Related Tail Fibre Protein-Like Protein; Tail Fiber Protein H; Variable Tail Fibre Protein; Tail Fiber-Related Protein; Phage Tail Collar Domain-Containing Protein; Phage Tail Collar Domain Protein; Phage Tail Fiber Protein H; Variable Tail Fiber Protein; Tail Fiber Domain Protein; Tail Fiber Domain-Containing Protein; Bacteriophage Tail Protein; Phage Tail Fibre Protein; Bacteriophage Variable Tail Fiber Protein H; Side Tail Phage Protein; Phage Variable Tail Fiber Protein; Phage Tail Fiber Domain Protein; Phage-Related Tail Fiber Protein-Like Protein; Tail Fiber Repeat 2 Protein; Phage Variable Tail Fibre Protein; Phage Tail Fiber-Like Protein; Phage P2 Tail Fiber GpH-Like Protein; Phage-Like Tail Fiber-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage Tail Collar; E14 Prophage; Bacteriophage Variable Tail Fibre Protein; Prophage Tail Fiber Protein; Phage Protein GpH; Phage-Like Tail Fibre Protein; Tail Fiber Repeat 2-Containing Protein; Tail Fiber Protein GpH

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MAEKFYTLLTEIGKAKIANSAGFGSKINFVKMKVGDGGGSYYNPREDQEDLINTVWEGNITHVAIDEKNPNWINVEMMIP
ANVGGFMIREYGVFDEDNNMLAIAKCAESYKPLAEDGSTKELIMKMVLTVSNTENITLKIDPTIIFAKKSEIEILENKIK
NIKIPVTSVNSKTGAIELKASDIKTEDGKTIESQLDDITTDNKRLTKDKTITGAINELFTSANNGKKLISDVVGNPLLAT
DTFQQQHDKIQILKNTFVTNLSKKEQGASSTENLQDLINKINNINVGKKWAEGTGKARESSNKEVCMSVTDLDFSPKTVI
INTRSDTYREPYIAIDCTLFKYKTQGWYSGGYIILDDGYVHKNNRGFDFYASNGHISKDTTFQWIAFE

Sequences:

>Translated_388_residues
MAEKFYTLLTEIGKAKIANSAGFGSKINFVKMKVGDGGGSYYNPREDQEDLINTVWEGNITHVAIDEKNPNWINVEMMIP
ANVGGFMIREYGVFDEDNNMLAIAKCAESYKPLAEDGSTKELIMKMVLTVSNTENITLKIDPTIIFAKKSEIEILENKIK
NIKIPVTSVNSKTGAIELKASDIKTEDGKTIESQLDDITTDNKRLTKDKTITGAINELFTSANNGKKLISDVVGNPLLAT
DTFQQQHDKIQILKNTFVTNLSKKEQGASSTENLQDLINKINNINVGKKWAEGTGKARESSNKEVCMSVTDLDFSPKTVI
INTRSDTYREPYIAIDCTLFKYKTQGWYSGGYIILDDGYVHKNNRGFDFYASNGHISKDTTFQWIAFE
>Mature_387_residues
AEKFYTLLTEIGKAKIANSAGFGSKINFVKMKVGDGGGSYYNPREDQEDLINTVWEGNITHVAIDEKNPNWINVEMMIPA
NVGGFMIREYGVFDEDNNMLAIAKCAESYKPLAEDGSTKELIMKMVLTVSNTENITLKIDPTIIFAKKSEIEILENKIKN
IKIPVTSVNSKTGAIELKASDIKTEDGKTIESQLDDITTDNKRLTKDKTITGAINELFTSANNGKKLISDVVGNPLLATD
TFQQQHDKIQILKNTFVTNLSKKEQGASSTENLQDLINKINNINVGKKWAEGTGKARESSNKEVCMSVTDLDFSPKTVII
NTRSDTYREPYIAIDCTLFKYKTQGWYSGGYIILDDGYVHKNNRGFDFYASNGHISKDTTFQWIAFE

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43316; Mature: 43185

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKFYTLLTEIGKAKIANSAGFGSKINFVKMKVGDGGGSYYNPREDQEDLINTVWEGNI
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCE
THVAIDEKNPNWINVEMMIPANVGGFMIREYGVFDEDNNMLAIAKCAESYKPLAEDGSTK
EEEEEECCCCCEEEEEEEEECCCCCEEEEEECCEECCCCEEEEEEHHHHCCCCCCCCCHH
ELIMKMVLTVSNTENITLKIDPTIIFAKKSEIEILENKIKNIKIPVTSVNSKTGAIELKA
HHHHHHHHEECCCCEEEEEECCEEEEEECCHHHHHHHHHCEEEEEEEECCCCCCEEEEEE
SDIKTEDGKTIESQLDDITTDNKRLTKDKTITGAINELFTSANNGKKLISDVVGNPLLAT
CCCCCCCCCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEE
DTFQQQHDKIQILKNTFVTNLSKKEQGASSTENLQDLINKINNINVGKKWAEGTGKARES
CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCC
SNKEVCMSVTDLDFSPKTVIINTRSDTYREPYIAIDCTLFKYKTQGWYSGGYIILDDGYV
CCCEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEEEEECCCEECCCEEEEECCEE
HKNNRGFDFYASNGHISKDTTFQWIAFE
ECCCCCEEEEECCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
AEKFYTLLTEIGKAKIANSAGFGSKINFVKMKVGDGGGSYYNPREDQEDLINTVWEGNI
CHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCE
THVAIDEKNPNWINVEMMIPANVGGFMIREYGVFDEDNNMLAIAKCAESYKPLAEDGSTK
EEEEEECCCCCEEEEEEEEECCCCCEEEEEECCEECCCCEEEEEEHHHHCCCCCCCCCHH
ELIMKMVLTVSNTENITLKIDPTIIFAKKSEIEILENKIKNIKIPVTSVNSKTGAIELKA
HHHHHHHHEECCCCEEEEEECCEEEEEECCHHHHHHHHHCEEEEEEEECCCCCCEEEEEE
SDIKTEDGKTIESQLDDITTDNKRLTKDKTITGAINELFTSANNGKKLISDVVGNPLLAT
CCCCCCCCCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEE
DTFQQQHDKIQILKNTFVTNLSKKEQGASSTENLQDLINKINNINVGKKWAEGTGKARES
CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCC
SNKEVCMSVTDLDFSPKTVIINTRSDTYREPYIAIDCTLFKYKTQGWYSGGYIILDDGYV
CCCEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEEEEECCCEECCCEEEEECCEE
HKNNRGFDFYASNGHISKDTTFQWIAFE
ECCCCCEEEEECCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA