Click here to switch to the map view.

The map label for this gene is 226949564

Identifier: 226949564

GI number: 226949564

Start: 2567654

End: 2567908

Strand: Reverse

Name: 226949564

Synonym: CLM_2501

Alternate gene names: NA

Gene position: 2567908-2567654 (Counterclockwise)

Preceding gene: 226949565

Following gene: 226949563

Centisome position: 61.8

GC content: 28.63

Gene sequence:

>255_bases
GTGGAATTAAAAATCTGCGAAGAAAAACATAAAAGGATAGAAGAAAAAATTAATGTTCATGATATTAGGCTTAATGATCA
TTCAAAGAGAATTGATAAAATAGAACAAAGCCAATCTAGGACAGATGCTAAAATTGAGAATCTTTGTGACCAATTAAAGC
AGCTTGTAGGTATTATGAAGTGGTATGTAGGATTAACAGTAGGAGGCTTAGTAAGCTTTTTTTTATATGCAATTCAACAT
AATATTTTTAAATAG

Upstream 100 bases:

>100_bases
ATAGATAAATATTATGAAGTAAATAAAAACTTAATAAAGGCAAAGTAGGGACCAAGAAGGTCTTTTTATTTTGCCTATTT
TTAATTACTGGAGGTGTAAT

Downstream 100 bases:

>100_bases
AAAGGTGGGCGTATAAATGAAGTTTTTAGAACAATTTCTACAGATTAAAAAGATAATAGCATTATTAACTACTATAGTAT
TTTGCATTTTAAGTGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MELKICEEKHKRIEEKINVHDIRLNDHSKRIDKIEQSQSRTDAKIENLCDQLKQLVGIMKWYVGLTVGGLVSFFLYAIQH
NIFK

Sequences:

>Translated_84_residues
MELKICEEKHKRIEEKINVHDIRLNDHSKRIDKIEQSQSRTDAKIENLCDQLKQLVGIMKWYVGLTVGGLVSFFLYAIQH
NIFK
>Mature_84_residues
MELKICEEKHKRIEEKINVHDIRLNDHSKRIDKIEQSQSRTDAKIENLCDQLKQLVGIMKWYVGLTVGGLVSFFLYAIQH
NIFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9926; Mature: 9926

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKICEEKHKRIEEKINVHDIRLNDHSKRIDKIEQSQSRTDAKIENLCDQLKQLVGIMK
CCCCHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WYVGLTVGGLVSFFLYAIQHNIFK
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELKICEEKHKRIEEKINVHDIRLNDHSKRIDKIEQSQSRTDAKIENLCDQLKQLVGIMK
CCCCHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WYVGLTVGGLVSFFLYAIQHNIFK
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA