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The map label for this gene is pcaC

Identifier: 226949279

GI number: 226949279

Start: 2261293

End: 2261625

Strand: Direct

Name: pcaC

Synonym: CLM_2198

Alternate gene names: NA

Gene position: 2261293-2261625 (Clockwise)

Preceding gene: 226949277

Following gene: 226949280

Centisome position: 54.42

GC content: 33.03

Gene sequence:

>333_bases
ATGAATACTTATTATGATCCCCAAGATCTTGCAAAATTCGGAACAATTGGAGAGGATGCACCTGAATTATGGGATAAATT
TCTTGAATATTATGGTGAAGTTTTTAAAGAAGGTAATTTAACTACTCGTGAAAAAGCAATTATAGCTTTAGCAGTAGCAC
ATGCATTACAATGTCCCTATTGTATAGATTCTTATACTCAAACTTGTTTAGAACAGGGTGTAAATAAAGAACAGATGATG
GAAGCAATTCATGTAGCTGCTGCAATTCGTGGAGGTGCTACTTTAGTTCATGGTGTTCAAATGAAAAATGTAGCAAATAA
ACTAGAACTTTAA

Upstream 100 bases:

>100_bases
TTGTGATTATATGCTAAAAATTAACATAACTCTATAGTTATGTAGATAAATATATCTATATAGATAAAATATTTTTAAAA
ATTTAAGGGAGGATATAGAA

Downstream 100 bases:

>100_bases
AAGGAGTAGTATATGAATAATAAAAGTTATTTAGAAGAATTAGATTGTATTCCTAGCTTTGAAAGCAAAGTAACTAATAA
AGATTTTTGTAAAACTAATA

Product: 4-carboxymuconolactone decarboxylase

Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNTYYDPQDLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPYCIDSYTQTCLEQGVNKEQMM
EAIHVAAAIRGGATLVHGVQMKNVANKLEL

Sequences:

>Translated_110_residues
MNTYYDPQDLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPYCIDSYTQTCLEQGVNKEQMM
EAIHVAAAIRGGATLVHGVQMKNVANKLEL
>Mature_110_residues
MNTYYDPQDLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPYCIDSYTQTCLEQGVNKEQMM
EAIHVAAAIRGGATLVHGVQMKNVANKLEL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: 4.1.1.44

Molecular weight: Translated: 12257; Mature: 12257

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYYDPQDLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPY
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
CIDSYTQTCLEQGVNKEQMMEAIHVAAAIRGGATLVHGVQMKNVANKLEL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTYYDPQDLAKFGTIGEDAPELWDKFLEYYGEVFKEGNLTTREKAIIALAVAHALQCPY
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
CIDSYTQTCLEQGVNKEQMMEAIHVAAAIRGGATLVHGVQMKNVANKLEL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate

Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA