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The map label for this gene is yclI [H]

Identifier: 226949249

GI number: 226949249

Start: 2223302

End: 2224765

Strand: Reverse

Name: yclI [H]

Synonym: CLM_2168

Alternate gene names: 226949249

Gene position: 2224765-2223302 (Counterclockwise)

Preceding gene: 226949251

Following gene: 226949248

Centisome position: 53.54

GC content: 31.28

Gene sequence:

>1464_bases
ATGAATTTTTTAAAGAGAGCTATGTTGAGTATATCAAAAAAGAAAATAAAGTCTTTGATATTATTTGTTGTACTCTTAGT
AATTGCTAATATGGTGTTGGTTGGATTGTCTATCCAAACTGCTACAAAAAAATCCACGGAACTAGCTAGAGAAAAATTAG
GCAGTGATGTAACACTTAGAGTTAATGAACAAAAATTTATGGAACAAAGAAGAAATAATAAAGAGGAGGGATCAAACAGC
AGACCATCTTTAACTACAGATATTGCAGATGCTTTAAAGGACAATGAGCATGTAACTCAGTATAATTATATTTCATCATC
CTTTGGACTCGCTAAAAATTTTGAAAATGTAAAAAATGAAGACAGCAGTGATGATACTAATTCTGAAGAAAAGCCAAGAG
GTATGTTTAAAATGGCAGGCAGTAGTACTACTACTATGCCAGAGATTTCTTTTTCAGGTACTATAGCTACAAATCTTTTA
TCTGATTTTAAAGATGGAGATAGTAAAATTACGGAAGGTAGAGGGATTACAAAGGATGATGCAGGAAAAAATGTGGCTGT
AATTGAGAAAAATTTGGCTAAAGAAAACAGCTTAAAAGTGGGAAGTAAAATACAAGTATCTTCCCTTGATGAAAATACTA
CACTAGAACTTGAAGTAGTGGGGATATATGAGGCAAATTCAGATGAAAGTACTAATGATAATAGAAATATGGATTTCTTA
AACCCATATAATAAAATATATATGCCTTATGATGTAGTTTCTAAAGTTTCAACTGGTGATAGTACTAATAGTAAAAATAT
TACTTCAGCAGTATATTTTATGGACAATGCTGATAATATAGAAAGTTTCAAAGAATATGCAAAAAATAAGAAAATAGATT
TAGAAACTTATACATTAGATGCCAATGATCAATTATATACGCAAATGGTAGGACCTATTGAAAATGTAGGATCTTTCTCA
AAAACCTTAGTGGCAACTGTATCCATTGCAGGAGCAATGATCTTAGTACTTATAATAGCATTATCTCTCAAGGATAGAAA
ATATGAAATAGGAGTATTATTATCTCTTGGAGAAAGCAAATTTAAAGTTATTTCTCAGCTAGTAGTTGAAGTACTTTTAG
TAGCTTCTATAGCTTTTGCTACTTCCGCATTTACAGGAAATTTAGCAGCTAATAAAATAGGAGATAGTTTACTTGCAAAA
GAAATTAAAGTAACAGAGTCCTCTACAACACAGGAAAATTCAAATTTTAGTGGGCGTGGTCCTATGGTGGTAGGTCCTGG
TAGGATGAATAGCAATGTTACTAAAAATGCAGATGTGGTAAAAGATATGGATGTTTCTGTAACTTCAAAGGATTTACAAA
AATTAGCAGGTATAGGATTACTTATAGTAATAGCCTCTGCTGCTATGCCAACTATATCTGTACTAAGATTTAGTCCTAAA
ACTATACTAAGTAAGAGAGAATAG

Upstream 100 bases:

>100_bases
TATTTTATATAAAAAACAAATTAGCTTCACAAAAAACACATAAAACTTTATTAGAATAACCTTTGTAAAAAACTTATAGG
ACTTAGGAGGTTATATAAAT

Downstream 100 bases:

>100_bases
GTAGGGGGATGTATATGAATACAGTTTTAGAATTTAAGAATGTAAATTATAGTTATAAAGATGCAGGAAAAGAATTAATA
ATTTTAGATAGTGTAGATTT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MNFLKRAMLSISKKKIKSLILFVVLLVIANMVLVGLSIQTATKKSTELAREKLGSDVTLRVNEQKFMEQRRNNKEEGSNS
RPSLTTDIADALKDNEHVTQYNYISSSFGLAKNFENVKNEDSSDDTNSEEKPRGMFKMAGSSTTTMPEISFSGTIATNLL
SDFKDGDSKITEGRGITKDDAGKNVAVIEKNLAKENSLKVGSKIQVSSLDENTTLELEVVGIYEANSDESTNDNRNMDFL
NPYNKIYMPYDVVSKVSTGDSTNSKNITSAVYFMDNADNIESFKEYAKNKKIDLETYTLDANDQLYTQMVGPIENVGSFS
KTLVATVSIAGAMILVLIIALSLKDRKYEIGVLLSLGESKFKVISQLVVEVLLVASIAFATSAFTGNLAANKIGDSLLAK
EIKVTESSTTQENSNFSGRGPMVVGPGRMNSNVTKNADVVKDMDVSVTSKDLQKLAGIGLLIVIASAAMPTISVLRFSPK
TILSKRE

Sequences:

>Translated_487_residues
MNFLKRAMLSISKKKIKSLILFVVLLVIANMVLVGLSIQTATKKSTELAREKLGSDVTLRVNEQKFMEQRRNNKEEGSNS
RPSLTTDIADALKDNEHVTQYNYISSSFGLAKNFENVKNEDSSDDTNSEEKPRGMFKMAGSSTTTMPEISFSGTIATNLL
SDFKDGDSKITEGRGITKDDAGKNVAVIEKNLAKENSLKVGSKIQVSSLDENTTLELEVVGIYEANSDESTNDNRNMDFL
NPYNKIYMPYDVVSKVSTGDSTNSKNITSAVYFMDNADNIESFKEYAKNKKIDLETYTLDANDQLYTQMVGPIENVGSFS
KTLVATVSIAGAMILVLIIALSLKDRKYEIGVLLSLGESKFKVISQLVVEVLLVASIAFATSAFTGNLAANKIGDSLLAK
EIKVTESSTTQENSNFSGRGPMVVGPGRMNSNVTKNADVVKDMDVSVTSKDLQKLAGIGLLIVIASAAMPTISVLRFSPK
TILSKRE
>Mature_487_residues
MNFLKRAMLSISKKKIKSLILFVVLLVIANMVLVGLSIQTATKKSTELAREKLGSDVTLRVNEQKFMEQRRNNKEEGSNS
RPSLTTDIADALKDNEHVTQYNYISSSFGLAKNFENVKNEDSSDDTNSEEKPRGMFKMAGSSTTTMPEISFSGTIATNLL
SDFKDGDSKITEGRGITKDDAGKNVAVIEKNLAKENSLKVGSKIQVSSLDENTTLELEVVGIYEANSDESTNDNRNMDFL
NPYNKIYMPYDVVSKVSTGDSTNSKNITSAVYFMDNADNIESFKEYAKNKKIDLETYTLDANDQLYTQMVGPIENVGSFS
KTLVATVSIAGAMILVLIIALSLKDRKYEIGVLLSLGESKFKVISQLVVEVLLVASIAFATSAFTGNLAANKIGDSLLAK
EIKVTESSTTQENSNFSGRGPMVVGPGRMNSNVTKNADVVKDMDVSVTSKDLQKLAGIGLLIVIASAAMPTISVLRFSPK
TILSKRE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 53111; Mature: 53111

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLKRAMLSISKKKIKSLILFVVLLVIANMVLVGLSIQTATKKSTELAREKLGSDVTLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEE
VNEQKFMEQRRNNKEEGSNSRPSLTTDIADALKDNEHVTQYNYISSSFGLAKNFENVKNE
ECHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHCCHHHHHHHHCCC
DSSDDTNSEEKPRGMFKMAGSSTTTMPEISFSGTIATNLLSDFKDGDSKITEGRGITKDD
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
AGKNVAVIEKNLAKENSLKVGSKIQVSSLDENTTLELEVVGIYEANSDESTNDNRNMDFL
CCCEEEEEEHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
NPYNKIYMPYDVVSKVSTGDSTNSKNITSAVYFMDNADNIESFKEYAKNKKIDLETYTLD
CCCHHEECCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEEC
ANDQLYTQMVGPIENVGSFSKTLVATVSIAGAMILVLIIALSLKDRKYEIGVLLSLGESK
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHH
FKVISQLVVEVLLVASIAFATSAFTGNLAANKIGDSLLAKEIKVTESSTTQENSNFSGRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC
PMVVGPGRMNSNVTKNADVVKDMDVSVTSKDLQKLAGIGLLIVIASAAMPTISVLRFSPK
CEEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHEECCH
TILSKRE
HHHCCCC
>Mature Secondary Structure
MNFLKRAMLSISKKKIKSLILFVVLLVIANMVLVGLSIQTATKKSTELAREKLGSDVTLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEE
VNEQKFMEQRRNNKEEGSNSRPSLTTDIADALKDNEHVTQYNYISSSFGLAKNFENVKNE
ECHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHCCHHHHHHHHCCC
DSSDDTNSEEKPRGMFKMAGSSTTTMPEISFSGTIATNLLSDFKDGDSKITEGRGITKDD
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
AGKNVAVIEKNLAKENSLKVGSKIQVSSLDENTTLELEVVGIYEANSDESTNDNRNMDFL
CCCEEEEEEHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
NPYNKIYMPYDVVSKVSTGDSTNSKNITSAVYFMDNADNIESFKEYAKNKKIDLETYTLD
CCCHHEECCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEEC
ANDQLYTQMVGPIENVGSFSKTLVATVSIAGAMILVLIIALSLKDRKYEIGVLLSLGESK
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHH
FKVISQLVVEVLLVASIAFATSAFTGNLAANKIGDSLLAKEIKVTESSTTQENSNFSGRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC
PMVVGPGRMNSNVTKNADVVKDMDVSVTSKDLQKLAGIGLLIVIASAAMPTISVLRFSPK
CEEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHEECCH
TILSKRE
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]