Click here to switch to the map view.

The map label for this gene is ydjX [C]

Identifier: 226949247

GI number: 226949247

Start: 2221650

End: 2222294

Strand: Reverse

Name: ydjX [C]

Synonym: CLM_2166

Alternate gene names: 226949247

Gene position: 2222294-2221650 (Counterclockwise)

Preceding gene: 226949248

Following gene: 226949246

Centisome position: 53.48

GC content: 22.64

Gene sequence:

>645_bases
ATGAAGATAAATAAAAAATACTTAGTTTTTACTTTATGTATAGTATGGATTATATCAATATATATATTTAATAAGTATGA
TTTTATATCACTTACTATAGAAATTATGAAAGGATATTTAGATTCAAATAAAGTAGGAATAATGGCTATTTTTGTTTTAC
TATGGATAGTAAGATTGCCTATTTTATTACCAGGATTTACATTAATAATATTAGGTGGTACTTTATTTGGAACAATTAAC
GGATTTTTATTATCTATGGTAGGAATGGTTTTAAGTGAGACTTTAGTATATGTGATAGCTAGAGTATTTTCTAATTGGAA
TATAAAAAATTTAATTAAAAAGAAGTATGATTATGTAGAGCCATTAATAAAAAAATATAATTTTAGATTTTTAGCCTTAG
GTATAGCATGCCCTATAGCGCCTACGGATGTAATATGCTTTTTATCCTCATCATTAGGATTGAGCTATATAAAATATATA
TTAACAATAATTATTTCTAATATACCTATAATAGCTATTTATAGTTATATGGGCATAAGTTATAAAGAATCTTCATTGAG
TGTTATAATACTTTGTTTATCAATAAGTGTATTAGCATTATATACAATGAAAATTTGGAATGGATTAAAGACAAATTATT
TATAA

Upstream 100 bases:

>100_bases
TAGAAATTTTGCTTCTTATTAAGAAAGTATTTATGGAGAAAAAATAAATATTTTTATACTTTTATTTAAGAAATAATAGG
ATGAGATTAAGGAGGGAATT

Downstream 100 bases:

>100_bases
GTGTTAAATAAATAAAGCTAACAAAAGAGTTATTATTAAAATTTACTTATGATTTAGTATTTTTATGGGGCTACATCACA
TAAGATTTAAAAGTAAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKINKKYLVFTLCIVWIISIYIFNKYDFISLTIEIMKGYLDSNKVGIMAIFVLLWIVRLPILLPGFTLIILGGTLFGTIN
GFLLSMVGMVLSETLVYVIARVFSNWNIKNLIKKKYDYVEPLIKKYNFRFLALGIACPIAPTDVICFLSSSLGLSYIKYI
LTIIISNIPIIAIYSYMGISYKESSLSVIILCLSISVLALYTMKIWNGLKTNYL

Sequences:

>Translated_214_residues
MKINKKYLVFTLCIVWIISIYIFNKYDFISLTIEIMKGYLDSNKVGIMAIFVLLWIVRLPILLPGFTLIILGGTLFGTIN
GFLLSMVGMVLSETLVYVIARVFSNWNIKNLIKKKYDYVEPLIKKYNFRFLALGIACPIAPTDVICFLSSSLGLSYIKYI
LTIIISNIPIIAIYSYMGISYKESSLSVIILCLSISVLALYTMKIWNGLKTNYL
>Mature_214_residues
MKINKKYLVFTLCIVWIISIYIFNKYDFISLTIEIMKGYLDSNKVGIMAIFVLLWIVRLPILLPGFTLIILGGTLFGTIN
GFLLSMVGMVLSETLVYVIARVFSNWNIKNLIKKKYDYVEPLIKKYNFRFLALGIACPIAPTDVICFLSSSLGLSYIKYI
LTIIISNIPIIAIYSYMGISYKESSLSVIILCLSISVLALYTMKIWNGLKTNYL

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24338; Mature: 24338

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKKYLVFTLCIVWIISIYIFNKYDFISLTIEIMKGYLDSNKVGIMAIFVLLWIVRLP
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ILLPGFTLIILGGTLFGTINGFLLSMVGMVLSETLVYVIARVFSNWNIKNLIKKKYDYVE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PLIKKYNFRFLALGIACPIAPTDVICFLSSSLGLSYIKYILTIIISNIPIIAIYSYMGIS
HHHHHHCCCEEEEEHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCC
YKESSLSVIILCLSISVLALYTMKIWNGLKTNYL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MKINKKYLVFTLCIVWIISIYIFNKYDFISLTIEIMKGYLDSNKVGIMAIFVLLWIVRLP
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ILLPGFTLIILGGTLFGTINGFLLSMVGMVLSETLVYVIARVFSNWNIKNLIKKKYDYVE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PLIKKYNFRFLALGIACPIAPTDVICFLSSSLGLSYIKYILTIIISNIPIIAIYSYMGIS
HHHHHHCCCEEEEEHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCC
YKESSLSVIILCLSISVLALYTMKIWNGLKTNYL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA