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The map label for this gene is 226949032

Identifier: 226949032

GI number: 226949032

Start: 2006514

End: 2006717

Strand: Direct

Name: 226949032

Synonym: CLM_1946

Alternate gene names: NA

Gene position: 2006514-2006717 (Clockwise)

Preceding gene: 226949030

Following gene: 226949033

Centisome position: 48.29

GC content: 31.86

Gene sequence:

>204_bases
ATGCCAAGTAATAGAAATTCTAATAATTTAGTAGTGCCAGAAGCACAACAAGGATTAAACCAACTAAAAATGGAAGTTGC
AAACGAAGTAGGAATAGCAAATTATGATTCAATGGATAAAGGAAACTTAACTTCAAGACAAAATGGATATGTAGGCGGAA
ACATGGTTAAAAAGATGGTAGAAGCTTACGAAAGAAATCTATAA

Upstream 100 bases:

>100_bases
GTTTTATATAATAATAAATTTAAAACTACACATACTTATAATACAAAACTTAATAAAGCATAAATAAAAACAAAAGACAA
ATAAATAGGAGGTAATATTT

Downstream 100 bases:

>100_bases
AATAAATACAAATATTAAAAAAATAAAATTTGAAGATAGGTGTATAAGGAGGTAATATATCATGGCGAATAGAAATTCTA
ATAATTTAGTAGTGCCAGAA

Product: small, acid-soluble spore protein alpha

Products: NA

Alternate protein names: ASSP; SASP [H]

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MPSNRNSNNLVVPEAQQGLNQLKMEVANEVGIANYDSMDKGNLTSRQNGYVGGNMVKKMVEAYERNL

Sequences:

>Translated_67_residues
MPSNRNSNNLVVPEAQQGLNQLKMEVANEVGIANYDSMDKGNLTSRQNGYVGGNMVKKMVEAYERNL
>Mature_66_residues
PSNRNSNNLVVPEAQQGLNQLKMEVANEVGIANYDSMDKGNLTSRQNGYVGGNMVKKMVEAYERNL

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 7431; Mature: 7300

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNRNSNNLVVPEAQQGLNQLKMEVANEVGIANYDSMDKGNLTSRQNGYVGGNMVKKMV
CCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
EAYERNL
HHHHCCC
>Mature Secondary Structure 
PSNRNSNNLVVPEAQQGLNQLKMEVANEVGIANYDSMDKGNLTSRQNGYVGGNMVKKMV
CCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
EAYERNL
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2599354 [H]