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The map label for this gene is yqbT [H]

Identifier: 226948774

GI number: 226948774

Start: 1716862

End: 1717971

Strand: Direct

Name: yqbT [H]

Synonym: CLM_1675

Alternate gene names: 226948774

Gene position: 1716862-1717971 (Clockwise)

Preceding gene: 226948773

Following gene: 226948775

Centisome position: 41.32

GC content: 34.14

Gene sequence:

>1110_bases
TTGAGTGTAAATGTAAAAACACAGGAAAAATTAATTAAAGATATGCTTAACAACATATCGAACACATATGAGAAAAGCGA
AGGACACCTTACATATGATATAACTAAAACTAATGCCATAGAATTAGCTTTACTATATCAATATGCTTTATCTATAGCCA
ATCTAAGGTTAGTTAAAGACCTAAGAGGTGATGATTTAACTGCAAGAGTCTACGATAATAAAGGCATAGTTAGGAAAGTA
GCAACAAGAGCAAAAGTAATCCTAACTCTAACAGGGACAGGGACTATTGATAAAGAGGATTTATTTGGTACACCTAACAA
GATAGAATTTGCAAGCCTAGAAAAAAAACAAATAGAAGGAACAGGAACAATATTAGCAGAGTGTACCCAAGTTGGTAATA
TAGGTATGGTTGGGGCTAATAGTATTGCAGAATTTCCGATAACAATAGCAGGCTTTACAGAAGTTAATAATTCTAATCCC
AGTTATGATGGTTTCGAGGAAGAAAGTGACGAATCACTTAGACAAAGATATTACGAATCTTTAAAGAACCCAATAACAAG
CAATAACCAAGCGCACTTTATTTATTGGGCTAAAAGTGCGACAGGTGTTGGAAATGCAAAGGTAATACCCTTGTGGGACG
GAGATTTAACAGTAAAGGTAATAATAATAAATTCCGATATGCAACCAGCCAGTGTGGATTTAGTCAATACAGTGCAGGAA
TACATAGACCCCAAAGGAATACTAGATACCAATACAAATACATGGAGTTTATGGGGAACTGGTGCTGGTGCTAGTGCTAT
AGGTAATTATTGTACTGTTGTGAGTGCTACAGCTAAAAATATAGATTTAGAGTGTTCTATCACTAAAGCCAATGGGTATT
CAGATGAAGAAATAAAACAAAACATTTCTAGTAAGATAGCAGAATATCTAAAAGAAATTGCTTTTTCTGCAACTATTAAT
TATGTAAGTCATGCTAAAATAATTTCTTTAATCCTATCTGCAGATGGGGTGTTGGATGCAACAAATGTAAAAGTAAATGG
AAGCTTAAGCGAAAACGTAATTATAGGTGAAGAAGAAGTCGCTACAATGGGCGCTGTAACCTTAATATAA

Upstream 100 bases:

>100_bases
ACTTTGTAACAACACAAGAAAAATCAATATTGAATGTAAGCTTTGATGTTGTTACAAAAGATAATGAAGTTATTAATATA
AGTGCCTAGGAGGTGAAGGG

Downstream 100 bases:

>100_bases
GAGGTGAAAAGATGAATATAGAACAACAGTTAATAGCAAATTTACATAAACGTGTTAGACAAGATTCTTATGTGAAAAAT
TTGTGCAACGCTAGTGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSVNVKTQEKLIKDMLNNISNTYEKSEGHLTYDITKTNAIELALLYQYALSIANLRLVKDLRGDDLTARVYDNKGIVRKV
ATRAKVILTLTGTGTIDKEDLFGTPNKIEFASLEKKQIEGTGTILAECTQVGNIGMVGANSIAEFPITIAGFTEVNNSNP
SYDGFEEESDESLRQRYYESLKNPITSNNQAHFIYWAKSATGVGNAKVIPLWDGDLTVKVIIINSDMQPASVDLVNTVQE
YIDPKGILDTNTNTWSLWGTGAGASAIGNYCTVVSATAKNIDLECSITKANGYSDEEIKQNISSKIAEYLKEIAFSATIN
YVSHAKIISLILSADGVLDATNVKVNGSLSENVIIGEEEVATMGAVTLI

Sequences:

>Translated_369_residues
MSVNVKTQEKLIKDMLNNISNTYEKSEGHLTYDITKTNAIELALLYQYALSIANLRLVKDLRGDDLTARVYDNKGIVRKV
ATRAKVILTLTGTGTIDKEDLFGTPNKIEFASLEKKQIEGTGTILAECTQVGNIGMVGANSIAEFPITIAGFTEVNNSNP
SYDGFEEESDESLRQRYYESLKNPITSNNQAHFIYWAKSATGVGNAKVIPLWDGDLTVKVIIINSDMQPASVDLVNTVQE
YIDPKGILDTNTNTWSLWGTGAGASAIGNYCTVVSATAKNIDLECSITKANGYSDEEIKQNISSKIAEYLKEIAFSATIN
YVSHAKIISLILSADGVLDATNVKVNGSLSENVIIGEEEVATMGAVTLI
>Mature_368_residues
SVNVKTQEKLIKDMLNNISNTYEKSEGHLTYDITKTNAIELALLYQYALSIANLRLVKDLRGDDLTARVYDNKGIVRKVA
TRAKVILTLTGTGTIDKEDLFGTPNKIEFASLEKKQIEGTGTILAECTQVGNIGMVGANSIAEFPITIAGFTEVNNSNPS
YDGFEEESDESLRQRYYESLKNPITSNNQAHFIYWAKSATGVGNAKVIPLWDGDLTVKVIIINSDMQPASVDLVNTVQEY
IDPKGILDTNTNTWSLWGTGAGASAIGNYCTVVSATAKNIDLECSITKANGYSDEEIKQNISSKIAEYLKEIAFSATINY
VSHAKIISLILSADGVLDATNVKVNGSLSENVIIGEEEVATMGAVTLI

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 40073; Mature: 39941

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNVKTQEKLIKDMLNNISNTYEKSEGHLTYDITKTNAIELALLYQYALSIANLRLVKD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LRGDDLTARVYDNKGIVRKVATRAKVILTLTGTGTIDKEDLFGTPNKIEFASLEKKQIEG
CCCCCEEEEEECCCCHHHHHHCCEEEEEEEECCCCCCHHHHCCCCCCEEEECCHHHHCCC
TGTILAECTQVGNIGMVGANSIAEFPITIAGFTEVNNSNPSYDGFEEESDESLRQRYYES
CCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LKNPITSNNQAHFIYWAKSATGVGNAKVIPLWDGDLTVKVIIINSDMQPASVDLVNTVQE
HCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHH
YIDPKGILDTNTNTWSLWGTGAGASAIGNYCTVVSATAKNIDLECSITKANGYSDEEIKQ
HCCCCCCEECCCCEEEEEECCCCHHHHCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHH
NISSKIAEYLKEIAFSATINYVSHAKIISLILSADGVLDATNVKVNGSLSENVIIGEEEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEECCCCCCCEEECCHHH
ATMGAVTLI
HHCCEEEEC
>Mature Secondary Structure 
SVNVKTQEKLIKDMLNNISNTYEKSEGHLTYDITKTNAIELALLYQYALSIANLRLVKD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LRGDDLTARVYDNKGIVRKVATRAKVILTLTGTGTIDKEDLFGTPNKIEFASLEKKQIEG
CCCCCEEEEEECCCCHHHHHHCCEEEEEEEECCCCCCHHHHCCCCCCEEEECCHHHHCCC
TGTILAECTQVGNIGMVGANSIAEFPITIAGFTEVNNSNPSYDGFEEESDESLRQRYYES
CCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LKNPITSNNQAHFIYWAKSATGVGNAKVIPLWDGDLTVKVIIINSDMQPASVDLVNTVQE
HCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHH
YIDPKGILDTNTNTWSLWGTGAGASAIGNYCTVVSATAKNIDLECSITKANGYSDEEIKQ
HCCCCCCEECCCCEEEEEECCCCHHHHCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHH
NISSKIAEYLKEIAFSATINYVSHAKIISLILSADGVLDATNVKVNGSLSENVIIGEEEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEECCCCCCCEEECCHHH
ATMGAVTLI
HHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]