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The map label for this gene is amiA [C]

Identifier: 226948697

GI number: 226948697

Start: 1658487

End: 1659338

Strand: Direct

Name: amiA [C]

Synonym: CLM_1595

Alternate gene names: 226948697

Gene position: 1658487-1659338 (Clockwise)

Preceding gene: 226948696

Following gene: 226948698

Centisome position: 39.91

GC content: 29.69

Gene sequence:

>852_bases
GTGAAGAAAAAGATAGTTTTAGTTATGTGTGTTATTACTTTGCTATTATTTAGTGCATGTACTAGTAAGGAAAATTTTAA
TAAAAAAGTTGGAGAAGAGAAGAAGGTAGTTAATAAAGAAGAAGAATCACAAAAGAAAAAAGAAAATGCATTTGGAAAGA
ATAATGAAGAAAAAGAGCATAATGATATATTAAAAGAAAAAAAAGAAGATAAATCTAAAGAAAATTTAAAAAATAAAATA
ATAGTAATAGATCCTGGTCATGGAAGCAAATCTAATTTAGAGTTAGAAAGAGTTTCTCCAGATAGTGAGGAAAAGAAGAT
TAAAGATGGTGGAGGAGCTGAAGGAGTAAATAGCAAAACTCCAGAGTATTTAATATCTATGGATGTAGCCTCAAAACTTA
AAGAAACTCTACAAAAGGAAGGTTATACTGTTATTATGACTAAAAATAAACATTCCGAGAGTTTAGGAAACATAGAAAGA
GCAGAAGTAGGAAATAAAAATAATGCTAATTTAGTTATAAGAATACATGCAGATTCAGCAGACTTAGAGGATGCTAAGGG
AGCTTCTATACTTGTACCATCTAAAAAAGGATATGCTTCAGAAATTAATGAATTAAGCAAAAAATATGGAGACATACTTC
TTAGGGAAATGGTAGCATCAGCTAATATGAACAATAGGGGTGTAATAGAGAGGGAGGATATGACAGGATTTAACTGGTCA
AAGGTTCCAGTAGTTTTAGTTGAAATGGGCTTTCTGTCAAATGCAGAAGAGGATAAGCTTTTAAATACTGAAGAATATAG
GATAAAAATAGTACAAGGCTTAACTAAAGGTATTAAAAAAGCCATAAATTAA

Upstream 100 bases:

>100_bases
GTAGCACTTCATTGCAAAGCTGCCTTTGATATTTTAAATTCATAATATAATGGTAGTAATATAATTTAGATTAAATTTTA
AAATAGGTTGTGAATATGAA

Downstream 100 bases:

>100_bases
TTGTTATATAAACAGAGTTCTTGGCTTTAGAGGGAGTTCTTACTCCCACTAAAGCTTATTAACAGAATTCTTAGGGGGGT
TTCTCCTTAGAAGTCGTTAT

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; N-Acetylmuramoyl-L-Alanine Amidase CwlD; N-Acetymuramyl-L-Alanine Amidase; Germination-Specific N-Acetylmuramoyl-L-Alanine Amidase; Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase-Like Protein; Surface Protein PspC; N-Acetymuramyl-L-Alanine Amidase-Related Protein; Cell Wall Glycoprotein Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase Containing SLH Domains

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKKKIVLVMCVITLLLFSACTSKENFNKKVGEEKKVVNKEEESQKKKENAFGKNNEEKEHNDILKEKKEDKSKENLKNKI
IVIDPGHGSKSNLELERVSPDSEEKKIKDGGGAEGVNSKTPEYLISMDVASKLKETLQKEGYTVIMTKNKHSESLGNIER
AEVGNKNNANLVIRIHADSADLEDAKGASILVPSKKGYASEINELSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
KVPVVLVEMGFLSNAEEDKLLNTEEYRIKIVQGLTKGIKKAIN

Sequences:

>Translated_283_residues
MKKKIVLVMCVITLLLFSACTSKENFNKKVGEEKKVVNKEEESQKKKENAFGKNNEEKEHNDILKEKKEDKSKENLKNKI
IVIDPGHGSKSNLELERVSPDSEEKKIKDGGGAEGVNSKTPEYLISMDVASKLKETLQKEGYTVIMTKNKHSESLGNIER
AEVGNKNNANLVIRIHADSADLEDAKGASILVPSKKGYASEINELSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
KVPVVLVEMGFLSNAEEDKLLNTEEYRIKIVQGLTKGIKKAIN
>Mature_283_residues
MKKKIVLVMCVITLLLFSACTSKENFNKKVGEEKKVVNKEEESQKKKENAFGKNNEEKEHNDILKEKKEDKSKENLKNKI
IVIDPGHGSKSNLELERVSPDSEEKKIKDGGGAEGVNSKTPEYLISMDVASKLKETLQKEGYTVIMTKNKHSESLGNIER
AEVGNKNNANLVIRIHADSADLEDAKGASILVPSKKGYASEINELSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
KVPVVLVEMGFLSNAEEDKLLNTEEYRIKIVQGLTKGIKKAIN

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28

Molecular weight: Translated: 31625; Mature: 31625

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIVLVMCVITLLLFSACTSKENFNKKVGEEKKVVNKEEESQKKKENAFGKNNEEKEH
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
NDILKEKKEDKSKENLKNKIIVIDPGHGSKSNLELERVSPDSEEKKIKDGGGAEGVNSKT
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCC
PEYLISMDVASKLKETLQKEGYTVIMTKNKHSESLGNIERAEVGNKNNANLVIRIHADSA
CHHEEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCHHHHCCCCCCCEEEEEEECCCC
DLEDAKGASILVPSKKGYASEINELSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCC
KVPVVLVEMGFLSNAEEDKLLNTEEYRIKIVQGLTKGIKKAIN
CCCEEEEEEHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKIVLVMCVITLLLFSACTSKENFNKKVGEEKKVVNKEEESQKKKENAFGKNNEEKEH
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
NDILKEKKEDKSKENLKNKIIVIDPGHGSKSNLELERVSPDSEEKKIKDGGGAEGVNSKT
HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCC
PEYLISMDVASKLKETLQKEGYTVIMTKNKHSESLGNIERAEVGNKNNANLVIRIHADSA
CHHEEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCHHHHCCCCCCCEEEEEEECCCC
DLEDAKGASILVPSKKGYASEINELSKKYGDILLREMVASANMNNRGVIEREDMTGFNWS
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCC
KVPVVLVEMGFLSNAEEDKLLNTEEYRIKIVQGLTKGIKKAIN
CCCEEEEEEHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA