Click here to switch to the map view.

The map label for this gene is tauC [C]

Identifier: 226948648

GI number: 226948648

Start: 1604593

End: 1605354

Strand: Direct

Name: tauC [C]

Synonym: CLM_1543

Alternate gene names: 226948648

Gene position: 1604593-1605354 (Clockwise)

Preceding gene: 226948647

Following gene: 226948649

Centisome position: 38.62

GC content: 27.03

Gene sequence:

>762_bases
ATGAAGATTTCTATTATAAGGGAAAATAAAACAATTTCAAAATTAGTTAGAAGAACTTTAATAATAATATTCTGGGTATT
TATATGGGAGCTTAGCTCCCTTTTTATAAATAACGAGATTTTGCTTCCATCACCTAAAAAAGTATTTGAAACTTTAATTA
TTCTTGGAATTAAGAGATATTTTTGGTTAAGTGTATTTAAAAGTATAGTAAGGGTAGTTATAGGAATTCTTATATCTATA
ATATTAGGAATTAGCTTAGGTATAATTGCAGGTATAAATGTTTTTATGGAGGAATTATTAGAACCTTTAGTAGTAACTAT
AAAGGCTACTCCTGTTATGTCAATCATAATAATAGCTTTAGTATGGCTCAAATCTTCTAGTGTAGCTATATTTACTAGTA
TACTTATGTGTTTCCCTATAATATATACTAATGTCTTATCAGGAATAAAGTCTGTGGATAAAAAATTAGTAGAAATGGCC
AATTTGTATGAGGTTAAAAATAAGTATATATTAATAAATATTTATCTTCCCTCTACTAAACCTTATATTATATCAGGAAT
ACTTATGTGTTTAGGCATAGGATGGAAAGTTTCTGTGGCCTCAGAGGTCTTAAGTACTCCTAAGTATTCTATAGGGTTAA
ATCTTCTAAATGCTAAAGCTACCTTAGCTACAGAGGAACTATTTGCATGGACTATAGTGGTGGTTTTACTTAGTCTTATA
TTTGAAAAAATATTTAGATATTATATTAAAAAAGTATTTTGA

Upstream 100 bases:

>100_bases
ATAGTATTTATGGATTCTAAAGATTCTAAGGATTCTCTAGAAAAATTTTATAATATTTTAAAAGACAATGACCCAAAATC
CATTGGAGGAAAACTACCAG

Downstream 100 bases:

>100_bases
GCAAAAGGTAGTGTATCTTTATAATATTAATGTTAGTGTATTTAGTAGTACATATGAGAATTGTTAAGAAGAGAGTCTGA
AATTAAGAATTACTTAATAT

Product: putative ABC transporter permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKISIIRENKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVFKSIVRVVIGILISI
ILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWLKSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLVEMA
NLYEVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWTIVVVLLSLI
FEKIFRYYIKKVF

Sequences:

>Translated_253_residues
MKISIIRENKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVFKSIVRVVIGILISI
ILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWLKSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLVEMA
NLYEVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWTIVVVLLSLI
FEKIFRYYIKKVF
>Mature_253_residues
MKISIIRENKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRYFWLSVFKSIVRVVIGILISI
ILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIALVWLKSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLVEMA
NLYEVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWTIVVVLLSLI
FEKIFRYYIKKVF

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=203, Percent_Identity=23.6453201970443, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081802, Length=203, Percent_Identity=30.5418719211823, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28668; Mature: 28668

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIIRENKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRY
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHH
FWLSVFKSIVRVVIGILISIILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWLKSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
PYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWTIVVVLLSLI
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEKIFRYYIKKVF
HHHHHHHHHHHHC
>Mature Secondary Structure
MKISIIRENKTISKLVRRTLIIIFWVFIWELSSLFINNEILLPSPKKVFETLIILGIKRY
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHH
FWLSVFKSIVRVVIGILISIILGISLGIIAGINVFMEELLEPLVVTIKATPVMSIIIIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWLKSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLVEMANLYEVKNKYILINIYLPSTK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
PYIISGILMCLGIGWKVSVASEVLSTPKYSIGLNLLNAKATLATEELFAWTIVVVLLSLI
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEKIFRYYIKKVF
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]