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The map label for this gene is ygbA [H]

Identifier: 226948616

GI number: 226948616

Start: 1568599

End: 1568913

Strand: Direct

Name: ygbA [H]

Synonym: CLM_1511

Alternate gene names: 226948616

Gene position: 1568599-1568913 (Clockwise)

Preceding gene: 226948615

Following gene: 226948618

Centisome position: 37.75

GC content: 25.71

Gene sequence:

>315_bases
ATGAAAAAATCTAGAATAGAAAAGCAAAAGGAAAGTATAGAATTTATGATAGGGCTATATTGTGGAAAAAAACATAAAAC
AAAAGAAGTATTATGTGATGATTGTAGGGAACTTTTGCAATATGCCAATTTTAGATTAGATCATTGCAGATTTGGAGAAA
AGAAACCAAATTGTGGTAGTTGTAAAATTCACTGCTATAAAAAAGAAATGAAAGAAAAAATAATAGAAGTAATGAAATTT
TCTGGACCAAGAAGCTTAATATATAATCCTAAAATAGCCTTTGAACATTTAGTAGATAAGATTAAATATAAATAG

Upstream 100 bases:

>100_bases
AATAAATGAGAATTGTGAACATAGAAGAGAAGTAGCACTAGTATAACTTTAATAAATTCAAATATTTAAAAGAGCTGCAG
TTTTAAGAGGTGTTGTTTAT

Downstream 100 bases:

>100_bases
AATATTGAAAGGAGATGCCTCAAGATACATTTAATCTTAAGACATCTCCTTTTAATTTTATTAGTATATACTTTGTAAAA
TAATTTTTTACTGCTGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKKSRIEKQKESIEFMIGLYCGKKHKTKEVLCDDCRELLQYANFRLDHCRFGEKKPNCGSCKIHCYKKEMKEKIIEVMKF
SGPRSLIYNPKIAFEHLVDKIKYK

Sequences:

>Translated_104_residues
MKKSRIEKQKESIEFMIGLYCGKKHKTKEVLCDDCRELLQYANFRLDHCRFGEKKPNCGSCKIHCYKKEMKEKIIEVMKF
SGPRSLIYNPKIAFEHLVDKIKYK
>Mature_104_residues
MKKSRIEKQKESIEFMIGLYCGKKHKTKEVLCDDCRELLQYANFRLDHCRFGEKKPNCGSCKIHCYKKEMKEKIIEVMKF
SGPRSLIYNPKIAFEHLVDKIKYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=99, Percent_Identity=37.3737373737374, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 12423; Mature: 12423

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSRIEKQKESIEFMIGLYCGKKHKTKEVLCDDCRELLQYANFRLDHCRFGEKKPNCGS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC
CKIHCYKKEMKEKIIEVMKFSGPRSLIYNPKIAFEHLVDKIKYK
EEEEHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSRIEKQKESIEFMIGLYCGKKHKTKEVLCDDCRELLQYANFRLDHCRFGEKKPNCGS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC
CKIHCYKKEMKEKIIEVMKFSGPRSLIYNPKIAFEHLVDKIKYK
EEEEHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]