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The map label for this gene is tal [H]

Identifier: 226948560

GI number: 226948560

Start: 1503613

End: 1504266

Strand: Direct

Name: tal [H]

Synonym: CLM_1452

Alternate gene names: 226948560

Gene position: 1503613-1504266 (Clockwise)

Preceding gene: 226948558

Following gene: 226948561

Centisome position: 36.19

GC content: 31.04

Gene sequence:

>654_bases
ATGAAAATATTCATAGATACGGCTAATGTAGAAGAAATAAGAAAAGCAAGTGAGTTAGGAGTTTTGTCAGGAGTAACAAC
AAATCCTTCATTAATAGCAAAAGAAGGAAGAGACTTAAAAGAAGTAGTAGAAGAAATTTGTAGTATAGTAGATGGTCCCA
TAAGTGCAGAAGTTATAAGTTTAGAATATGAGAAAATGATAGAAGAAGGAAGAGAATTATCTAAATTGCATAAAAACATA
GTTATAAAAATACCTATGTGCGAAGAAGGGCTAAAAGCAGTTAGTGTTTTATCTAAAGAAGGAATAAAAACAAATGTAAC
CTTAATATTTTCATCAATGCAAGCCTTATTAGCAGCTAGAGCTGGAGCAACCTATGTAAGTCCTTTTTTAGGGAGATTAG
ATGATATAGGAAATCCGGGTATTGAAGTTGTAAAGCAAATAGCTGATATGTTTAAAATTCATGAAATAAAAACAGAAATA
ATTGCAGCCAGTGTGAGAACACCTATGCATGTATTAGAAGCTGCAATGGCAGGATCTCATATAGCTACAATACCATATAA
AGTTATAATTCAAATGTCAAAGCATGCATTAACTGATATAGGAATTGAAAAATTTATGAAAGACTATGAAAAAGCCTTTG
GAGAAAGCAAATAA

Upstream 100 bases:

>100_bases
GAACTTTATAAGAGAAAATGTATAATAAGAAATATAATAATAAAATAAATATAATTATTGTAGTATAATTTATTATGAAA
TATTTAAAGGAGATGGCAAA

Downstream 100 bases:

>100_bases
TTTAAAGTAGATATATAATAAGAGGGTATCTCAAAAAATAGATTTAAATCTATTAAGAGGTACCCTTACTTATATTTATT
AAGATTTAGCGTTAAAATAT

Product: putative translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKIFIDTANVEEIRKASELGVLSGVTTNPSLIAKEGRDLKEVVEEICSIVDGPISAEVISLEYEKMIEEGRELSKLHKNI
VIKIPMCEEGLKAVSVLSKEGIKTNVTLIFSSMQALLAARAGATYVSPFLGRLDDIGNPGIEVVKQIADMFKIHEIKTEI
IAASVRTPMHVLEAAMAGSHIATIPYKVIIQMSKHALTDIGIEKFMKDYEKAFGESK

Sequences:

>Translated_217_residues
MKIFIDTANVEEIRKASELGVLSGVTTNPSLIAKEGRDLKEVVEEICSIVDGPISAEVISLEYEKMIEEGRELSKLHKNI
VIKIPMCEEGLKAVSVLSKEGIKTNVTLIFSSMQALLAARAGATYVSPFLGRLDDIGNPGIEVVKQIADMFKIHEIKTEI
IAASVRTPMHVLEAAMAGSHIATIPYKVIIQMSKHALTDIGIEKFMKDYEKAFGESK
>Mature_217_residues
MKIFIDTANVEEIRKASELGVLSGVTTNPSLIAKEGRDLKEVVEEICSIVDGPISAEVISLEYEKMIEEGRELSKLHKNI
VIKIPMCEEGLKAVSVLSKEGIKTNVTLIFSSMQALLAARAGATYVSPFLGRLDDIGNPGIEVVKQIADMFKIHEIKTEI
IAASVRTPMHVLEAAMAGSHIATIPYKVIIQMSKHALTDIGIEKFMKDYEKAFGESK

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=169, Percent_Identity=31.9526627218935, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI87081788, Length=218, Percent_Identity=34.4036697247706, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1790382, Length=218, Percent_Identity=37.1559633027523, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1788807, Length=163, Percent_Identity=36.1963190184049, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786189, Length=163, Percent_Identity=34.3558282208589, Blast_Score=77, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI25153750, Length=174, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321480, Length=203, Percent_Identity=31.0344827586207, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323386, Length=131, Percent_Identity=37.4045801526718, Blast_Score=65, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45549185, Length=164, Percent_Identity=32.9268292682927, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 23757; Mature: 23757

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFIDTANVEEIRKASELGVLSGVTTNPSLIAKEGRDLKEVVEEICSIVDGPISAEVIS
CEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
LEYEKMIEEGRELSKLHKNIVIKIPMCEEGLKAVSVLSKEGIKTNVTLIFSSMQALLAAR
HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGATYVSPFLGRLDDIGNPGIEVVKQIADMFKIHEIKTEIIAASVRTPMHVLEAAMAGSH
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IATIPYKVIIQMSKHALTDIGIEKFMKDYEKAFGESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIFIDTANVEEIRKASELGVLSGVTTNPSLIAKEGRDLKEVVEEICSIVDGPISAEVIS
CEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
LEYEKMIEEGRELSKLHKNIVIKIPMCEEGLKAVSVLSKEGIKTNVTLIFSSMQALLAAR
HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGATYVSPFLGRLDDIGNPGIEVVKQIADMFKIHEIKTEIIAASVRTPMHVLEAAMAGSH
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IATIPYKVIIQMSKHALTDIGIEKFMKDYEKAFGESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA