| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226948533
Identifier: 226948533
GI number: 226948533
Start: 1478577
End: 1480802
Strand: Direct
Name: 226948533
Synonym: CLM_1425
Alternate gene names: NA
Gene position: 1478577-1480802 (Clockwise)
Preceding gene: 226948532
Following gene: 226948534
Centisome position: 35.58
GC content: 21.38
Gene sequence:
>2226_bases ATGGGGGGAAGTTATAATTTATATAAAATAAAAGACATATCTTGCATAAGCAAATATTGTAATTGTTTGCAATTGGTATT TGAGGACTTATACGATCTGAAAAAATATTTTAATGAAAATAAAACTTTATTTTGTAATAAAGCTTTATATGTGCTTATTA ATAAAATAATAATTTCAAAGATATTTATGGAGAAAAATAATATAACAGGTGAATTGGCTAAAAAAAATATAAAATATTAT GCATTAACTTTAGATACTATAAATCTTGTAAATTTGGTATTTGATAATGTTGATAAGAGATTTTTAGAATCTATCTTTAA AGATAATATAAAATATGAGTATATAAATCCTAGTTATTATAGTTTAGATAAGGAAGATTTTTTGCATTATGAGGATAATT TATTCTATAGATACAATATATTTTTAAATAAAATTATAGATGAAATAAATGGGTTTGATTTTATACATAGTAGTTGTGAA ATAGGAGAAATATATGAAAAAATAATAGCTAAGGAATATAAAAAATCTATGGGAATATTTTATACACCAGAATATATTAT TGATTACATATTGGAGAATGTTTTTTATGAGTTTTCACCACTGGAAAACCCTTTTGTTAAATTAATAGATATATCCGCAG GGGCAGGATATTTTATTATTAAAGCTTATGATAAGTTGAAAAAAGTTTTTACAGAAAATATACAAAGTTTGCAAGAAAAA TATAAACAAAATATTTATACTATTAGAAAAAAAGGACAATCTATTAAAGTAACTGGTGAATATTATTGGCAAAAAGAAAA CTTACACTATCATATAATTAATAATTGTATATATGCAGCAGATATAGATATATACGCTATCCAAATAACAACCATAAATT TACTTTTAAAGGATACGAAATCTTATGTAGGTAAGGTAAACGTTGTCAATTGTGATAGTCTTATAAGGTGGGAAAAAGAT TTTAATCCTACTATTAAATTTTTAGATAATAAATATAAATATAAAACCTATAAAATAAAAAATAAAGGCATTGAAGAAGC TGTTAATTATAAAGAAAAAGAGGTATGTAATTGGAAAGCATACTTTAAACTGTATAAATTTTGGAGAAAAAAATTTGATT ATATTATAGGCAATCCTCCGTGGGTTTCTTTATCTAGAAAAAATAAAAAAGCTTGTTGGAAAAATTCTTTAGAGTATTAT ATCAAAAATTACGGTCAGTGTGTACATTCTCCTAATTTATTTGAGTATTTTATAAAGAGAGCTTTAGAAAAAACAAAGAA AGATGGATATTTAGCCTTTGTTGTGCCAATAAATTTTAGTAGGAATTCTCAATACATACAATTAAGAAATGAAATATTGA ATAAATATGAGATTAAAAATTTATTTTTTAATATAGCTTTTTCTGGAGTTATAACAGACGGAATGGTATTTATTTTGAAA AAAAATAAAAAATGTTTTAATGAAATAAAAATTAAAGTACAAGGAAAAGATGAGTATAAAATAGATAAAAATGAACTTTT TTGCTGTAATGAGTATGGATTTACATTTAATAATAATGATTTTGATGAAAAAATAAAAAATAAAATTTTAGAAAACTCTA GTTTTTTATCAGAAATAAGTGATACATTTACAGGATTTATAGGAGACTGTAAAAATATATATAAAGAGAATGTAGACAAG TCTTATATTAAAATATATAAAGGAAAAAATATAAAAAAATTTATATGCTATTCCTATTTTTATTATGATTTTAAAGATGA AAATATTAAAGGTGGAACAAAAGATTTAAAAAAATTAAAATATAAAGGTAAAATATTAGTTAGAAAAACAGGAAATGAAA TTATAGCAGCTTATGATGAAGAAGGTATTATAATAGAACAGTCATTATATGGAATAATTAATTTAAAACAAAACTTTAGT CATAAATATATATTAGGTATTTTAAATTCCCAGTTAATGAGTTGGTATTACAAAAAGTACTTAATAACAAATAAAGAGTC TACTCCACAACTGAAGAAATATAGATTGAATAAAATTCCTATAAAAAATTGCAATAAAAATGTTCAAGAGGAAGTAGAAA TATTAGCTGATAAAATTTTTCAAGCTTTAAAAAATGAAAATGTGAAGGAAATAGACTATTATTACAAAATATTAAACCAA AAAGTGTTCAGTATTTATGGTATTGATGATATAAAAATAATAAAATATATAATTAATGATAAGTAA
Upstream 100 bases:
>100_bases ATATAAAAGATAATGCTTTTGTTTCTGTAAAGTAACAAGTACTTTAAAATATAAATATTTAAATAAAATAGCTTTGTATA AGTGATATGGGGGATGAAAT
Downstream 100 bases:
>100_bases AGAAATGTATAAATGTATATAAAAATAAGGTTTTTCTAATTACTATGAAATATATATAAATGAAAAAACGTTAATTTTGA ACAAAGTAATATGTTATTTT
Product: restriction endonuclease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MGGSYNLYKIKDISCISKYCNCLQLVFEDLYDLKKYFNENKTLFCNKALYVLINKIIISKIFMEKNNITGELAKKNIKYY ALTLDTINLVNLVFDNVDKRFLESIFKDNIKYEYINPSYYSLDKEDFLHYEDNLFYRYNIFLNKIIDEINGFDFIHSSCE IGEIYEKIIAKEYKKSMGIFYTPEYIIDYILENVFYEFSPLENPFVKLIDISAGAGYFIIKAYDKLKKVFTENIQSLQEK YKQNIYTIRKKGQSIKVTGEYYWQKENLHYHIINNCIYAADIDIYAIQITTINLLLKDTKSYVGKVNVVNCDSLIRWEKD FNPTIKFLDNKYKYKTYKIKNKGIEEAVNYKEKEVCNWKAYFKLYKFWRKKFDYIIGNPPWVSLSRKNKKACWKNSLEYY IKNYGQCVHSPNLFEYFIKRALEKTKKDGYLAFVVPINFSRNSQYIQLRNEILNKYEIKNLFFNIAFSGVITDGMVFILK KNKKCFNEIKIKVQGKDEYKIDKNELFCCNEYGFTFNNNDFDEKIKNKILENSSFLSEISDTFTGFIGDCKNIYKENVDK SYIKIYKGKNIKKFICYSYFYYDFKDENIKGGTKDLKKLKYKGKILVRKTGNEIIAAYDEEGIIIEQSLYGIINLKQNFS HKYILGILNSQLMSWYYKKYLITNKESTPQLKKYRLNKIPIKNCNKNVQEEVEILADKIFQALKNENVKEIDYYYKILNQ KVFSIYGIDDIKIIKYIINDK
Sequences:
>Translated_741_residues MGGSYNLYKIKDISCISKYCNCLQLVFEDLYDLKKYFNENKTLFCNKALYVLINKIIISKIFMEKNNITGELAKKNIKYY ALTLDTINLVNLVFDNVDKRFLESIFKDNIKYEYINPSYYSLDKEDFLHYEDNLFYRYNIFLNKIIDEINGFDFIHSSCE IGEIYEKIIAKEYKKSMGIFYTPEYIIDYILENVFYEFSPLENPFVKLIDISAGAGYFIIKAYDKLKKVFTENIQSLQEK YKQNIYTIRKKGQSIKVTGEYYWQKENLHYHIINNCIYAADIDIYAIQITTINLLLKDTKSYVGKVNVVNCDSLIRWEKD FNPTIKFLDNKYKYKTYKIKNKGIEEAVNYKEKEVCNWKAYFKLYKFWRKKFDYIIGNPPWVSLSRKNKKACWKNSLEYY IKNYGQCVHSPNLFEYFIKRALEKTKKDGYLAFVVPINFSRNSQYIQLRNEILNKYEIKNLFFNIAFSGVITDGMVFILK KNKKCFNEIKIKVQGKDEYKIDKNELFCCNEYGFTFNNNDFDEKIKNKILENSSFLSEISDTFTGFIGDCKNIYKENVDK SYIKIYKGKNIKKFICYSYFYYDFKDENIKGGTKDLKKLKYKGKILVRKTGNEIIAAYDEEGIIIEQSLYGIINLKQNFS HKYILGILNSQLMSWYYKKYLITNKESTPQLKKYRLNKIPIKNCNKNVQEEVEILADKIFQALKNENVKEIDYYYKILNQ KVFSIYGIDDIKIIKYIINDK >Mature_740_residues GGSYNLYKIKDISCISKYCNCLQLVFEDLYDLKKYFNENKTLFCNKALYVLINKIIISKIFMEKNNITGELAKKNIKYYA LTLDTINLVNLVFDNVDKRFLESIFKDNIKYEYINPSYYSLDKEDFLHYEDNLFYRYNIFLNKIIDEINGFDFIHSSCEI GEIYEKIIAKEYKKSMGIFYTPEYIIDYILENVFYEFSPLENPFVKLIDISAGAGYFIIKAYDKLKKVFTENIQSLQEKY KQNIYTIRKKGQSIKVTGEYYWQKENLHYHIINNCIYAADIDIYAIQITTINLLLKDTKSYVGKVNVVNCDSLIRWEKDF NPTIKFLDNKYKYKTYKIKNKGIEEAVNYKEKEVCNWKAYFKLYKFWRKKFDYIIGNPPWVSLSRKNKKACWKNSLEYYI KNYGQCVHSPNLFEYFIKRALEKTKKDGYLAFVVPINFSRNSQYIQLRNEILNKYEIKNLFFNIAFSGVITDGMVFILKK NKKCFNEIKIKVQGKDEYKIDKNELFCCNEYGFTFNNNDFDEKIKNKILENSSFLSEISDTFTGFIGDCKNIYKENVDKS YIKIYKGKNIKKFICYSYFYYDFKDENIKGGTKDLKKLKYKGKILVRKTGNEIIAAYDEEGIIIEQSLYGIINLKQNFSH KYILGILNSQLMSWYYKKYLITNKESTPQLKKYRLNKIPIKNCNKNVQEEVEILADKIFQALKNENVKEIDYYYKILNQK VFSIYGIDDIKIIKYIINDK
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR011639 [H]
Pfam domain/function: PF07669 Eco57I; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 88385; Mature: 88254
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSYNLYKIKDISCISKYCNCLQLVFEDLYDLKKYFNENKTLFCNKALYVLINKIIISK CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH IFMEKNNITGELAKKNIKYYALTLDTINLVNLVFDNVDKRFLESIFKDNIKYEYINPSYY HHHHCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC SLDKEDFLHYEDNLFYRYNIFLNKIIDEINGFDFIHSSCEIGEIYEKIIAKEYKKSMGIF CCCHHHCCEECCCEEEEEHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCE YTPEYIIDYILENVFYEFSPLENPFVKLIDISAGAGYFIIKAYDKLKKVFTENIQSLQEK ECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH YKQNIYTIRKKGQSIKVTGEYYWQKENLHYHIINNCIYAADIDIYAIQITTINLLLKDTK HHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEECCEEEEECCEEEEEEEEEEEHHHHHHH SYVGKVNVVNCDSLIRWEKDFNPTIKFLDNKYKYKTYKIKNKGIEEAVNYKEKEVCNWKA HHCCEEEEEECHHHHEECCCCCCHHHCCCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHH YFKLYKFWRKKFDYIIGNPPWVSLSRKNKKACWKNSLEYYIKNYGQCVHSPNLFEYFIKR HHHHHHHHHHHCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALEKTKKDGYLAFVVPINFSRNSQYIQLRNEILNKYEIKNLFFNIAFSGVITDGMVFILK HHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE KNKKCFNEIKIKVQGKDEYKIDKNELFCCNEYGFTFNNNDFDEKIKNKILENSSFLSEIS CCCCCCEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHH DTFTGFIGDCKNIYKENVDKSYIKIYKGKNIKKFICYSYFYYDFKDENIKGGTKDLKKLK HHHHHHHHHHHHHHHCCCCCHHEEEECCCCCHHEEEEEEEEEEECCCCCCCCHHHHHHHH YKGKILVRKTGNEIIAAYDEEGIIIEQSLYGIINLKQNFSHKYILGILNSQLMSWYYKKY HCCEEEEEECCCCEEEEECCCCEEEEECHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LITNKESTPQLKKYRLNKIPIKNCNKNVQEEVEILADKIFQALKNENVKEIDYYYKILNQ EEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KVFSIYGIDDIKIIKYIINDK HHEEEECCCHHHHHHHHHCCC >Mature Secondary Structure GGSYNLYKIKDISCISKYCNCLQLVFEDLYDLKKYFNENKTLFCNKALYVLINKIIISK CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH IFMEKNNITGELAKKNIKYYALTLDTINLVNLVFDNVDKRFLESIFKDNIKYEYINPSYY HHHHCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC SLDKEDFLHYEDNLFYRYNIFLNKIIDEINGFDFIHSSCEIGEIYEKIIAKEYKKSMGIF CCCHHHCCEECCCEEEEEHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCE YTPEYIIDYILENVFYEFSPLENPFVKLIDISAGAGYFIIKAYDKLKKVFTENIQSLQEK ECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH YKQNIYTIRKKGQSIKVTGEYYWQKENLHYHIINNCIYAADIDIYAIQITTINLLLKDTK HHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEECCEEEEECCEEEEEEEEEEEHHHHHHH SYVGKVNVVNCDSLIRWEKDFNPTIKFLDNKYKYKTYKIKNKGIEEAVNYKEKEVCNWKA HHCCEEEEEECHHHHEECCCCCCHHHCCCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHH YFKLYKFWRKKFDYIIGNPPWVSLSRKNKKACWKNSLEYYIKNYGQCVHSPNLFEYFIKR HHHHHHHHHHHCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALEKTKKDGYLAFVVPINFSRNSQYIQLRNEILNKYEIKNLFFNIAFSGVITDGMVFILK HHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE KNKKCFNEIKIKVQGKDEYKIDKNELFCCNEYGFTFNNNDFDEKIKNKILENSSFLSEIS CCCCCCEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHH DTFTGFIGDCKNIYKENVDKSYIKIYKGKNIKKFICYSYFYYDFKDENIKGGTKDLKKLK HHHHHHHHHHHHHHHCCCCCHHEEEECCCCCHHEEEEEEEEEEECCCCCCCCHHHHHHHH YKGKILVRKTGNEIIAAYDEEGIIIEQSLYGIINLKQNFSHKYILGILNSQLMSWYYKKY HCCEEEEEECCCCEEEEECCCCEEEEECHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LITNKESTPQLKKYRLNKIPIKNCNKNVQEEVEILADKIFQALKNENVKEIDYYYKILNQ EEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KVFSIYGIDDIKIIKYIINDK HHEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]