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The map label for this gene is xylP [H]

Identifier: 226948466

GI number: 226948466

Start: 1414159

End: 1415535

Strand: Direct

Name: xylP [H]

Synonym: CLM_1352

Alternate gene names: 226948466

Gene position: 1414159-1415535 (Clockwise)

Preceding gene: 226948464

Following gene: 226948467

Centisome position: 34.03

GC content: 27.89

Gene sequence:

>1377_bases
GTGAACATAGCAAATTATAAAGTTAATAATAATCCCAATAAAGAAATCATTAATTTTTCTGAGAAACTTGGATATGGATT
AGGAGATTTCGCATGTAATTTGGTTTGGAATTCACTTAGTATGTTTATATTATATTTCTATACTGATGTTATGGGAATGA
AGGCAGCTATAATAAGTACACTGATGTTGGTTGTTCGTATAATTGCAGGGTTTATGGATATTGCTTCAGGAATTGTAGTT
GATAAAACAAAAACAAAGTATGGTAAAGCTAGACCATGGATTTTATGGATGGCAATTCCTTTTGGAATAAGTACAATATT
ACTTTTTTCTATTCCTAATATAGGGGAAAGTGGTAAGTTAGTTTATGTTGTTATAACCTATGTATTATTAAATGTAATTT
ATACAGCAATAAATATTCCATATGGTGTATTAAATTCTTTAATGACCCAAGATCAAAATGAAAGGTCAGAAATTAATATT
TATAGAATGTTTTGCTCAACTGCTGGATCACTTTGTGTTAGTGTTTTAGTCTTACCTCTTGTATCTTTATTTGGAGGAGA
ACAAGGTGCATGGATTATAACCTTTGCTATATTTGGTATAGTTGCAACATTTATGTTCTTTATTACATTTAAAACAACAA
AAGAAAGAGTTACAGCAGTGAATGAAGAAAAATCACAAAATATTTCCTTTAAAGATGGAATGAAAGCTTTAATTCAAAAT
AAATATTGGATAATTATAGTTTTATTATTAGTTGTACTTTTTATGAATATGGGAATTATGGGTGGAAGTATGATTTATTA
CGCTCAGTATATACTTAATGGTAAGAAGTTAGTTGGAGGATTATCAATAGCACAAAATATTCCTACACTGATTGTTATGC
TAACTATTGCGATGCCATTAATAAAAAAGTATGGTAAAAGGAATACTGCAATTTCGGGTTCTATTATTTTCATTTTAGGT
TCATTATTTGCTCTAATAGATTTAACAAGCGTTAAGTTAATTTATATTTCTATCATTGTAAAAGGAACTGGGAATGCGTT
AATTTCTGCTACTGTTTTTGCTTTATTAGCAGATACAATTGAATATGGTGAATGGAAAACAAATGTTAGGACAGAAGGGC
TAGTTTATAGTGCAGGAAACTTTGGATTAAAAATTGGAATCGGATTGGGTACAGCAATTGTAGGATGGTTATTAGCATTT
AGTAATTATAATGGATCATCTAAAATTCAAACAAATACAGCTATAAATGCTATTAACATTTTATTTATATGGTTACCAAT
GATTTTATCAGGTGTACAAATTATTTTACTTAAATTTTATAAGTTAGATAAAATATACCCAAATATTATTAGCGATTTAG
AAAATAGAAAGATATAG

Upstream 100 bases:

>100_bases
ACACTTACTGTTAACGTTAATATAGTATTTTAAAAATAAATTTAGTGGCTATCTTTGTGCAGAATAAAATGATTTATAAA
TCAAAGGAGGAGGAATATAG

Downstream 100 bases:

>100_bases
AAGGAGGAAGAATATGAAATTTATACAGTATAAAACTACTAAAAAAGATAAATTCTTAAAAAACGAAATTAATAATACTA
CAGATGAAAGACCAACATTA

Product: sugar transporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRIIAGFMDIASGIVV
DKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGESGKLVYVVITYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINI
YRMFCSTAGSLCVSVLVLPLVSLFGGEQGAWIITFAIFGIVATFMFFITFKTTKERVTAVNEEKSQNISFKDGMKALIQN
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNGKKLVGGLSIAQNIPTLIVMLTIAMPLIKKYGKRNTAISGSIIFILG
SLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAF
SNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRKI

Sequences:

>Translated_458_residues
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRIIAGFMDIASGIVV
DKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGESGKLVYVVITYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINI
YRMFCSTAGSLCVSVLVLPLVSLFGGEQGAWIITFAIFGIVATFMFFITFKTTKERVTAVNEEKSQNISFKDGMKALIQN
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNGKKLVGGLSIAQNIPTLIVMLTIAMPLIKKYGKRNTAISGSIIFILG
SLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAF
SNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRKI
>Mature_458_residues
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIISTLMLVVRIIAGFMDIASGIVV
DKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGESGKLVYVVITYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINI
YRMFCSTAGSLCVSVLVLPLVSLFGGEQGAWIITFAIFGIVATFMFFITFKTTKERVTAVNEEKSQNISFKDGMKALIQN
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNGKKLVGGLSIAQNIPTLIVMLTIAMPLIKKYGKRNTAISGSIIFILG
SLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAF
SNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRKI

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Homo sapiens, GI122937339, Length=453, Percent_Identity=20.0883002207506, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1786466, Length=445, Percent_Identity=33.0337078651685, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI87082306, Length=441, Percent_Identity=31.7460317460317, Blast_Score=235, Evalue=5e-63,
Organism=Escherichia coli, GI1787902, Length=443, Percent_Identity=30.4740406320542, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI145693206, Length=467, Percent_Identity=28.051391862955, Blast_Score=179, Evalue=4e-46,
Organism=Escherichia coli, GI48994989, Length=453, Percent_Identity=25.60706401766, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1790561, Length=440, Percent_Identity=28.4090909090909, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50693; Mature: 50693

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIIST
CCCCCEEECCCCCHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLVVRIIAGFMDIASGIVVDKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGESGKL
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCC
VYVVITYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINIYRMFCSTAGSLCVSVLVLPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSLFGGEQGAWIITFAIFGIVATFMFFITFKTTKERVTAVNEEKSQNISFKDGMKALIQN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCC
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNGKKLVGGLSIAQNIPTLIVMLTIAMPL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKYGKRNTAISGSIIFILGSLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTI
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHH
EYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTNTAINAINI
HCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHH
LFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILYFYTDVMGMKAAIIST
CCCCCEEECCCCCHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLVVRIIAGFMDIASGIVVDKTKTKYGKARPWILWMAIPFGISTILLFSIPNIGESGKL
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCC
VYVVITYVLLNVIYTAINIPYGVLNSLMTQDQNERSEINIYRMFCSTAGSLCVSVLVLPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSLFGGEQGAWIITFAIFGIVATFMFFITFKTTKERVTAVNEEKSQNISFKDGMKALIQN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCC
KYWIIIVLLLVVLFMNMGIMGGSMIYYAQYILNGKKLVGGLSIAQNIPTLIVMLTIAMPL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKYGKRNTAISGSIIFILGSLFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTI
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHH
EYGEWKTNVRTEGLVYSAGNFGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTNTAINAINI
HCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHH
LFIWLPMILSGVQIILLKFYKLDKIYPNIISDLENRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]